RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 AP3S2P59780 193 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 LCN12Q6JVE5 192 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 MOB1BQ7L9L4 216 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 OR4K15Q8NH41 348 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 MRPL30Q8TCC3 161 aaKnown RBP13.14□□□□□ -0.31
TOP3A-202ENST00000461127 CCDC107Q8WV48 283 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 TAS2R8Q9NYW2 309 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 KLK11Q9UBX7 282 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 ZNF230Q9UIE0 474 aaPredicted RBP13.14□□□□□ -0.31
TOP3A-202ENST00000461127 RNF150Q9ULK6 438 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 SPINT2O43291 252 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 TPPP2P59282 170 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 TMEM30BQ3MIR4 351 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 C19orf54Q5BKX5 351 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 STEAP3Q658P3 488 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 ZNF660Q6AZW8 331 aaPredicted RBP13.13□□□□□ -0.31
TOP3A-202ENST00000461127 HOGA1Q86XE5 327 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 TOMM5Q8N4H5 51 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 ZNF439Q8NDP4 499 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 ABHD5Q8WTS1 349 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 MAFIPQ8WZ33 124 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 TRIM63Q969Q1 353 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 RANGRFQ9HD47 186 aaPredicted RBP13.13□□□□□ -0.31
TOP3A-202ENST00000461127 KCNIP1Q9NZI2 227 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
TOP3A-202ENST00000461127 RBMX2Q9Y388 322 aaKnown RBP13.13□□□□□ -0.31
TOP3A-202ENST00000461127 TRBV6-6A0A0A6YYG2 114 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 LINC00854A0A1B0GVQ3 168 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-202ENST00000461127 CT45A1Q5HYN5 189 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 C6orf183Q5T699 404 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 GAPTQ8N292 157 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 BEST4Q8NFU0 473 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 CT45A3Q8NHU0 189 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 SLA2Q9H6Q3 261 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 Q9N2K0 584 aa13.12□□□□□ -0.31
TOP3A-202ENST00000461127 HLA-DMAP28067 261 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 ZNF134P52741 427 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 TAS2R19P59542 299 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 ARPC4P59998 168 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 ACTBL2Q562R1 376 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 TMEM229BQ8NBD8 167 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 NPBQ8NG41 125 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 OR10V1Q8NGI7 309 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 OR9G4Q8NGQ1 327 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 RITA1Q96K30 269 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 RHOVQ96L33 236 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 MS4A10Q96PG2 267 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 ANAPC10Q9UM13 185 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 FBXO7Q9Y3I1 522 aa13.11□□□□□ -0.31
TOP3A-202ENST00000461127 ANKRD20A5PA0PJZ0 165 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 TRDCB7Z8K6 153 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 CNIH1O95406 144 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 RCC1P18754 421 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-202ENST00000461127 FAUP35544 74 aaKnown RBP13.1□□□□□ -0.31
TOP3A-202ENST00000461127 OR3A3P47888 321 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 TAS2R46P59540 309 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 DEFA1P59665 94 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 DEFA3P59666 94 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 NDPQ00604 133 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 PLGLAQ15195 96 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 ZNF880Q6PDB4 577 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 LINC00322Q6ZN03 302 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-202ENST00000461127 PLEKHA3Q9HB20 300 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 ANXA10Q9UJ72 324 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 NUBP2Q9Y5Y2 271 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 PCLOQ9Y6V0 5065 aa13.1□□□□□ -0.31
TOP3A-202ENST00000461127 CXorf65A6NEN9 183 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 CENPXA8MT69 81 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 NDUFA3O95167 84 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 BRI3O95415 125 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 TRGV3P03979 118 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 AKAIN1P0CW23 69 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 NAT1P18440 290 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 TBPP20226 339 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 CX3CL1P78423 397 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 HLA-DRB3P79483 266 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 KLF9Q13886 244 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-202ENST00000461127 RNASE10Q5GAN6 216 aaKnown RBP13.09□□□□□ -0.31
TOP3A-202ENST00000461127 STEAP1BQ6NZ63 245 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 UNQ5815/PRO19632Q6UWF5 114 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 Q6ZS49 121 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 PPP1R27Q86WC6 154 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 LYSMD2Q8IV50 215 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 PRR18Q8N4B5 295 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 OR5H2Q8NGV7 314 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 SNAPC3Q92966 411 aa13.09□□□□□ -0.31
TOP3A-202ENST00000461127 MBNL3Q9NUK0 354 aaKnown RBP13.09□□□□□ -0.31
TOP3A-202ENST00000461127 C13orf42A0A1B0GVH6 325 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 NUPR2A6NF83 97 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 FABP7O15540 132 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 RAB3DO95716 219 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 PMP2P02689 132 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 CD3DP04234 171 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 CD81P60033 236 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 IFITM3Q01628 133 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 DYRK1AQ13627 763 aa13.08□□□□□ -0.32
TOP3A-202ENST00000461127 KLF5Q13887 457 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms