RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 SPSB4Q96A44 273 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 NKX6-2Q9C056 277 aaPredicted RBP8.12□□□□□ -1.11
EPB41-208ENST00000460378 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 MTCH1Q9NZJ7 389 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 MDFIC2A0A1B0GVS7 189 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 HELTA6NFD8 242 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 IFITM5A6NNB3 132 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 C22orf46C9J442 243 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 MOGAT2Q3SYC2 334 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 MYPOPQ86VE0 399 aaPredicted RBP8.12□□□□□ -1.11
EPB41-208ENST00000460378 TERB2Q8NHR7 220 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 AK3Q9UIJ7 227 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 FLVCR2Q9UPI3 526 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 IGHV3OR16-12A0A075B7B8 117 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 TNFRSF13BO14836 293 aaPredicted RBP8.12□□□□□ -1.11
EPB41-208ENST00000460378 OR2J3O76001 311 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 ANOS1P23352 680 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 FABP5Q01469 135 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 TOR2AQ5JU69 321 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 LINC01590Q5TEZ4 76 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 FAAP20Q6NZ36 180 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 ORAI1Q96D31 301 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 RBM14Q96PK6 669 aaKnown RBP8.12□□□□□ -1.11
EPB41-208ENST00000460378 OR2W1Q9Y3N9 320 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 URGCP-MRPS24S4R325 110 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 USP9XQ93008 2570 aaPredicted RBP8.12□□□□□ -1.11
EPB41-208ENST00000460378 RAB19A4D1S5 217 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 SCGB1D1O95968 90 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 PTBP1P26599 531 aaKnown RBP eCLIP8.12□□□□□ -1.118e-8■■■■□ 24.9
EPB41-208ENST00000460378 ETV6P41212 452 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 ZNF66Q6ZN08 573 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 Q6ZR03 302 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 DERL3Q96Q80 235 aa8.12□□□□□ -1.11
EPB41-208ENST00000460378 KIR3DL2P43630 455 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 CLINT1Q14677 625 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 ATPAF1Q5TC12 328 aaPredicted RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 SLIRPQ9GZT3 109 aaKnown RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 SLC25A31Q9H0C2 315 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 RBM38Q9H0Z9 239 aaKnown RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 SERTAD4Q9NUC0 356 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 USP24Q9UPU5 2620 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 CCL24O00175 119 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 PAX8Q06710 450 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 IAH1Q2TAA2 248 aaPredicted RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 TMEM177Q53S58 311 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 DDB2Q92466 427 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 USMG5Q96IX5 58 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 SRRQ9GZT4 340 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 SIAH2O43255 324 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 HPRT1P00492 218 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 GIPP09681 153 aaPredicted RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 CFPP27918 469 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 NTF4P34130 210 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 AANATQ16613 207 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 XAF1Q6GPH4 301 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 TMEM88Q6PEY1 159 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 STHQ8IWL8 128 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 BCL6BQ8N143 479 aaPredicted RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 RNF5Q99942 180 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 NDFIP1Q9BT67 221 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 MALRD1Q5VYJ5 2156 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 A0A0G2JK05 382 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 FGF16O43320 207 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 OSR1Q8TAX0 266 aaPredicted RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 RBMXL1Q96E39 390 aaKnown RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 SLC25A21Q9BQT8 299 aaPredicted RBP8.11□□□□□ -1.11
EPB41-208ENST00000460378 MAGT1Q9H0U3 335 aa8.11□□□□□ -1.11
EPB41-208ENST00000460378 C17orf112F2Z3M2 114 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 VENTXO95231 258 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 LYPD3O95274 346 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 HIST1H3AP68431 136 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 HIST2H3AQ71DI3 136 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 KCNRGQ8N5I3 272 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 LFNGQ8NES3 379 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 MRPL20Q9BYC9 149 aaKnown RBP8.1□□□□□ -1.11
EPB41-208ENST00000460378 TMPRSS13Q9BYE2 586 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 TRAV30A0A087WSZ9 112 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 PPP1R2P9O14990 202 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 RD3LP0DJH9 198 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 NPPCP23582 126 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 LOXP28300 417 aaPredicted RBP8.1□□□□□ -1.11
EPB41-208ENST00000460378 GALR1P47211 349 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 APOC4P55056 127 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 HBG1P69891 147 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 HBG2P69892 147 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 OR8I2Q8N0Y5 310 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 TMED6Q8WW62 240 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 TMED3Q9Y3Q3 217 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 IGHV1-3A0A0C4DH29 117 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 A0A1W2PPV4 95 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 BMPR1BO00238 502 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 GGCTO75223 188 aaKnown RBP8.1□□□□□ -1.11
EPB41-208ENST00000460378 CD5P06127 495 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 HOXB4P17483 251 aaPredicted RBP8.1□□□□□ -1.11
EPB41-208ENST00000460378 KIAA0141Q14154 515 aaPredicted RBP8.1□□□□□ -1.11
EPB41-208ENST00000460378 Q6YL49 198 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 GPX8Q8TED1 209 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 CLEC18AA5D8T8 446 aa8.1□□□□□ -1.11
EPB41-208ENST00000460378 FLI1Q01543 452 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms