RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 ARL16Q0P5N6 197 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 TMEM14EPQ6UXP3 125 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 TMEM144Q7Z5S9 345 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 CALHM1Q8IU99 346 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 OR2H1Q9GZK4 316 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 NAGKQ9UJ70 344 aa13.2□□□□□ -0.3
CMTM3-203ENST00000460097 CD300LBA8K4G0 201 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 DEGS1O15121 323 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 OR4A8P0C604 315 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 ESDP10768 282 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 TGFBR3Q03167 851 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 HIST2H2BCQ6DN03 193 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 TEX38Q6PEX7 206 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 BHLHA15Q7RTS1 189 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-203ENST00000460097 RPP25LQ8N5L8 163 aaKnown RBP13.19□□□□□ -0.3
CMTM3-203ENST00000460097 ALKBH3Q96Q83 286 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-203ENST00000460097 OR4C12Q96R67 309 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
CMTM3-203ENST00000460097 TRAV9-1A0A075B6T8 112 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-203ENST00000460097 DLEU1O43261 78 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 ZNF32P17041 273 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 MDKP21741 143 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-203ENST00000460097 FOXG1P55316 489 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-203ENST00000460097 PSG4Q00888 419 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 C9orf135Q5VTT2 229 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 MKXQ8IYA7 352 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 PIGCQ92535 297 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 NEIL1Q96FI4 390 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-203ENST00000460097 WFIKKN1Q96NZ8 548 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 WNT5BQ9H1J7 359 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 CRIM1Q9NZV1 1036 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
CMTM3-203ENST00000460097 POLR3KQ9Y2Y1 108 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-203ENST00000460097 GYPAP02724 150 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
CMTM3-203ENST00000460097 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 Q6ZRM9 215 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 FAM222BQ8WU58 562 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 TMEM37Q8WXS4 190 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 GPR35Q9HC97 309 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 LIN7CQ9NUP9 197 aaKnown RBP13.17□□□□□ -0.3
CMTM3-203ENST00000460097 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 HECTD1Q9ULT8 2610 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 CRYBG3Q68DQ2 2970 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 A0A1W2PPQ1 181 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 H3BP45 60 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 YPEL3P61236 119 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-203ENST00000460097 SLC38A11Q08AI6 406 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 MOB1BQ7L9L4 216 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 ZNF837Q96EG3 531 aaPredicted RBP13.17□□□□□ -0.3
CMTM3-203ENST00000460097 TXNDC17Q9BRA2 123 aa13.17□□□□□ -0.3
CMTM3-203ENST00000460097 PKDREJQ9NTG1 2253 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 PDE6DO43924 150 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 IGKV1-39P01597 117 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 IGKV1D-39P04432 117 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 PSG2P11465 335 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 BCL3P20749 454 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 TUBG1P23258 451 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 GABRA6Q16445 453 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 CEACAM16Q2WEN9 425 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 TEX43Q6ZNM6 134 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 C22orf34Q6ZV56 151 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 C1orf162Q8NEQ5 155 aaPredicted RBP13.16□□□□□ -0.3
CMTM3-203ENST00000460097 OR10V1Q8NGI7 309 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 OR10J5Q8NHC4 309 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 TMEM147Q9BVK8 224 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 GOLT1BQ9Y3E0 138 aa13.16□□□□□ -0.3
CMTM3-203ENST00000460097 NBPF19A0A087WUL8 3843 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 YPEL1O60688 119 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 IGKV1-5P01602 117 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 OR3A1P47881 315 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 SELENOTP62341 195 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 GNB2P62879 340 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 PDCD1Q15116 288 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 VWC2Q2TAL6 325 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 CEACAM21Q3KPI0 293 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 TIMM23BQ5SRD1 257 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 RPUSD4Q96CM3 377 aaKnown RBP13.15□□□□□ -0.3
CMTM3-203ENST00000460097 YPEL2Q96QA6 119 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 FOXB1Q99853 325 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 MIEN1Q9BRT3 115 aa13.15□□□□□ -0.3
CMTM3-203ENST00000460097 SCGB1D1O95968 90 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 IGKV1D-33P01593 117 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 IGKV1-33P01594 117 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 MMP7P09237 267 aaPredicted RBP13.15□□□□□ -0.31
CMTM3-203ENST00000460097 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.31
CMTM3-203ENST00000460097 IL3RAP26951 378 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 ELLP55199 621 aaPredicted RBP13.15□□□□□ -0.31
CMTM3-203ENST00000460097 PPP1CBP62140 327 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 NECAP1Q8NC96 275 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 OR1K1Q8NGR3 316 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 ELOVL1Q9BW60 279 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 CBLN4Q9NTU7 201 aa13.15□□□□□ -0.31
CMTM3-203ENST00000460097 ANKHD1Q8IWZ3 2542 aaKnown RBP13.14□□□□□ -0.31
CMTM3-203ENST00000460097 RNF212BA8MTL3 300 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms