RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 TRIQKQ629K1 86 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 ABHD5Q8WTS1 349 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 ARPC1AQ92747 370 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 BET1LQ9NYM9 111 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 TRAV41A0A0B4J266 112 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 TCRBV4S1A1TA0A5B7 111 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 CD3DP04234 171 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 F2RL1P55085 397 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 HSD17B13Q7Z5P4 300 aaPredicted RBP8.46□□□□□ -1.06
UBR4-208ENST00000459947 DRAXINQ8NBI3 349 aaPredicted RBP8.46□□□□□ -1.06
UBR4-208ENST00000459947 TMEM167AQ8TBQ9 72 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 THAP7Q9BT49 309 aaPredicted RBP8.46□□□□□ -1.06
UBR4-208ENST00000459947 COPZ2Q9P299 210 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 KLK11Q9UBX7 282 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 FOXA2Q9Y261 457 aaPredicted RBP8.46□□□□□ -1.06
UBR4-208ENST00000459947 CENPXA8MT69 81 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 SLC25A17O43808 307 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 CRYGBP07316 175 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 TOMM5Q8N4H5 51 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 RNF152Q8N8N0 203 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 C5orf30Q96GV9 206 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 SLA2Q9H6Q3 261 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 PARP11Q9NR21 331 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 OR2A4O95047 310 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 CNIH1O95406 144 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 CD83Q01151 205 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 DHODHQ02127 395 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 AKIRIN2Q53H80 203 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 RNASE12Q5GAN4 147 aaKnown RBP8.45□□□□□ -1.06
UBR4-208ENST00000459947 Q8N402 240 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 OR2A7Q96R45 310 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 FKBP11Q9NYL4 201 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 IGHV7-81A0A0B4J1V7 117 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 LINC00473A8K010 186 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 PGLYRP1O75594 196 aaPredicted RBP8.45□□□□□ -1.06
UBR4-208ENST00000459947 IGLV2-23P01705 113 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 IGHG4P01861 327 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 GNRHRP30968 328 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 PRSS8Q16651 343 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 TMEM65Q6PI78 240 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 ZNF818PQ6ZRF7 136 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 SPIN2AQ99865 258 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 SPIN2BQ9BPZ2 258 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 PTTG2Q9NZH5 202 aa8.45□□□□□ -1.06
UBR4-208ENST00000459947 J3QRK9 145 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 M0QYG6 137 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 V9GYH0 126 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 A6NHS1 94 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 H0Y980 276 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 IGLV2-14P01704 120 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 CX3CL1P78423 397 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 SRPXP78539 464 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 FXYD3Q14802 87 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 PUSL1Q8N0Z8 303 aaKnown RBP8.44□□□□□ -1.06
UBR4-208ENST00000459947 TINAGL1Q9GZM7 467 aaPredicted RBP8.44□□□□□ -1.06
UBR4-208ENST00000459947 DHFRP00374 187 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 CA2P00918 260 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 IGKV1-16P04430 117 aa8.44□□□□□ -1.06
UBR4-208ENST00000459947 SLC25A21Q9BQT8 299 aaPredicted RBP8.44□□□□□ -1.06
UBR4-208ENST00000459947 TET2Q6N021 2002 aaPredicted RBP8.43□□□□□ -1.06
UBR4-208ENST00000459947 SNAPC5O75971 98 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 KBTBD11O94819 623 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 SERPINE2P07093 398 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 OR4C16Q8NGL9 310 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 RHOVQ96L33 236 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 CCDC32Q9BV29 185 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 RPL23AP62750 156 aaKnown RBP8.43□□□□□ -1.06
UBR4-208ENST00000459947 RPL30P62888 115 aaKnown RBP8.43□□□□□ -1.06
UBR4-208ENST00000459947 SCGB2B2Q4G0G5 96 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 KCNIP3Q9Y2W7 256 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 NUBP2Q9Y5Y2 271 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 NF1P21359 2839 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 ATP6V0E1O15342 81 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 SAA1P0DJI8 122 aaPredicted RBP8.43□□□□□ -1.06
UBR4-208ENST00000459947 ANXA3P12429 323 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 CFHR3Q02985 330 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 UNQ5815/PRO19632Q6UWF5 114 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 OR51H1Q8NH63 302 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 R3HDM4Q96D70 268 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 PHB2Q99623 299 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 SLC2A9Q9NRM0 540 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 PRNDQ9UKY0 176 aa8.43□□□□□ -1.06
UBR4-208ENST00000459947 MPPED1O15442 326 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 RLN1P04808 185 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 CNTFRP26992 372 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 UBE2MP61081 183 aaKnown RBP8.42□□□□□ -1.06
UBR4-208ENST00000459947 MINDY2Q8NBR6 621 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 DMBX1Q8NFW5 382 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 HSPB9Q9BQS6 159 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 WDR12Q9GZL7 423 aaKnown RBP8.42□□□□□ -1.06
UBR4-208ENST00000459947 A0A0G2JLM5 398 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 PF4V1P10720 104 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 HIST1H1BP16401 226 aaKnown RBP8.42□□□□□ -1.06
UBR4-208ENST00000459947 LPAR6P43657 344 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 RPL27AP46776 148 aaKnown RBP8.42□□□□□ -1.06
UBR4-208ENST00000459947 RPL8P62917 257 aaKnown RBP8.42□□□□□ -1.06
UBR4-208ENST00000459947 KLF9Q13886 244 aaPredicted RBP8.42□□□□□ -1.06
UBR4-208ENST00000459947 TNXAQ16473 311 aa8.42□□□□□ -1.06
UBR4-208ENST00000459947 TMEM95Q3KNT9 176 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms