RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GNRHRP30968 328 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 CHRNA7P36544 502 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 RAB9AP51151 201 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 RNASE10Q5GAN6 216 aaKnown RBP12.64□□□□□ -0.39
CD28-203ENST00000458610 ZNF818PQ6ZRF7 136 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 LAX1Q8IWV1 398 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 MMD2Q8IY49 270 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 SPAG16Q8N0X2 631 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 LFNGQ8NES3 379 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 OR52I2Q8NH67 350 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 MCFD2Q8NI22 146 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 ABHD1Q96SE0 405 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 RSL24D1Q9UHA3 163 aaKnown RBP12.64□□□□□ -0.39
CD28-203ENST00000458610 WNK1Q9H4A3 2382 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 GPR31O00270 319 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 OR2A4O95047 310 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 DUS4LO95620 317 aaKnown RBP12.63□□□□□ -0.39
CD28-203ENST00000458610 HPRT1P00492 218 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 EGR2P11161 476 aaPredicted RBP12.63□□□□□ -0.39
CD28-203ENST00000458610 NDPQ00604 133 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 IL18Q14116 193 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 PRSS8Q16651 343 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 OR2B11Q5JQS5 317 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 AADACL3Q5VUY0 350 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 GRPEL2Q8TAA5 225 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 OR2A7Q96R45 310 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 SLA2Q9H6Q3 261 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 KLK11Q9UBX7 282 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 VSIG4Q9Y279 399 aa12.63□□□□□ -0.39
CD28-203ENST00000458610 CTDSPLO15194 276 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 SAA1P0DJI8 122 aaPredicted RBP12.62□□□□□ -0.39
CD28-203ENST00000458610 MAS1LP35410 378 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 UCP3P55916 312 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 TAS2R19P59542 299 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 TNXAQ16473 311 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 C19orf54Q5BKX5 351 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 RNASE12Q5GAN4 147 aaKnown RBP12.62□□□□□ -0.39
CD28-203ENST00000458610 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 ARRDC1Q8N5I2 433 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 TMEM229BQ8NBD8 167 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 OR4A5Q8NH83 315 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 C4orf3Q8WVX3 66 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 RHOVQ96L33 236 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 PHB2Q99623 299 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 FAM103A1Q9BTL3 118 aaKnown RBP12.62□□□□□ -0.39
CD28-203ENST00000458610 GPR61Q9BZJ8 451 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 SLIRPQ9GZT3 109 aaKnown RBP12.62□□□□□ -0.39
CD28-203ENST00000458610 TPSG1Q9NRR2 321 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 FBXO7Q9Y3I1 522 aa12.62□□□□□ -0.39
CD28-203ENST00000458610 H3BUA1 57 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 CCL24O00175 119 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 ARPC1BO15143 372 aaKnown RBP12.61□□□□□ -0.39
CD28-203ENST00000458610 PGLYRP1O75594 196 aaPredicted RBP12.61□□□□□ -0.39
CD28-203ENST00000458610 NQO2P16083 231 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 S100A5P33763 92 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 TAS2R31P59538 309 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 PJVKQ0ZLH3 352 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 SLC38A6Q8IZM9 456 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 ZNF491Q8N8L2 437 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 MYOZ3Q8TDC0 251 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 RCC1LQ96I51 464 aaKnown RBP12.61□□□□□ -0.39
CD28-203ENST00000458610 SPIN2AQ99865 258 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 SPIN2BQ9BPZ2 258 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 MCRIP2Q9BUT9 160 aaKnown RBP12.61□□□□□ -0.39
CD28-203ENST00000458610 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
CD28-203ENST00000458610 PLEKHA2Q9HB19 425 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 ZNF355PQ9NSJ1 428 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 NDUFA13Q9P0J0 144 aa12.61□□□□□ -0.39
CD28-203ENST00000458610 FABP12A6NFH5 140 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 MSGN1A6NI15 193 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 MPPED1O15442 326 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 RAB3DO95716 219 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 F2RP25116 425 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 LCNL1Q6ZST4 164 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 OR51H1Q8NH63 302 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 SMIM4Q8WVI0 70 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 BATF3Q9NR55 127 aa12.6□□□□□ -0.39
CD28-203ENST00000458610 A0A0G2JLM5 398 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 M0QYG6 137 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 KBTBD11O94819 623 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 BRI3O95415 125 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 CD3DP04234 171 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 TNFSF8P32971 234 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 BRWD1-AS2P59051 145 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 ERVK-16P61578 105 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 RUNX1Q01196 453 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 MEF2DQ14814 521 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 STEAP1BQ6NZ63 245 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 IDO2Q6ZQW0 420 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 C18orf65Q6ZTR6 163 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
CD28-203ENST00000458610 PUSL1Q8N0Z8 303 aaKnown RBP12.59□□□□□ -0.39
CD28-203ENST00000458610 SRSF12Q8WXF0 261 aaKnown RBP12.59□□□□□ -0.39
CD28-203ENST00000458610 DGCR14Q96DF8 476 aaKnown RBP12.59□□□□□ -0.39
CD28-203ENST00000458610 ZNF486Q96H40 463 aaPredicted RBP12.59□□□□□ -0.39
CD28-203ENST00000458610 GPHA2Q96T91 129 aa12.59□□□□□ -0.39
CD28-203ENST00000458610 P2RX4Q99571 388 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms