RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 RELBQ01201 579 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 CBX3Q13185 183 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 PPP1R1AQ13522 171 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 DCTN2Q13561 401 aaKnown RBP6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 PLGLAQ15195 96 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 IZUMO4Q1ZYL8 232 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 TRIM16LQ309B1 348 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 TMEM177Q53S58 311 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 DHRS7BQ6IAN0 325 aaPredicted RBP6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 LIN54Q6MZP7 749 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 SLC25A42Q86VD7 318 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 SGPP2Q8IWX5 399 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 TMEM86BQ8N661 226 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 Q8N9W7 124 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 OR4C13Q8NGP0 309 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 OR4S2Q8NH73 311 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 LHFPL5Q8TAF8 219 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 R3HDM4Q96D70 268 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 JMJD8Q96S16 334 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 RASL11BQ9BPW5 248 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 SEC22CQ9BRL7 303 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 C19orf24Q9BVV8 132 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 METTL1Q9UBP6 276 aaKnown RBP6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 LINC00527Q9UJ94 153 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 PITPNC1Q9UKF7 332 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 NSG2Q9Y328 171 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 MOB4Q9Y3A3 225 aa6.9□□□□□ -1.3
CLTCL1-204ENST00000458188 H0Y980 276 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 CLDN34H7C241 214 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 RRHO14718 337 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 SFT2D2O95562 160 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 HPRT1P00492 218 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 CRYBA1P05813 215 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 OR4E1P0C645 316 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 SAA1P0DJI8 122 aaPredicted RBP6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 KIR2DS2P43631 304 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 TMEM187Q14656 261 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 TMEM95Q3KNT9 176 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 ANKRD55Q3KP44 614 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 KRTAP24-1Q3LI83 254 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 C4orf46Q504U0 113 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 HIST2H2BDQ6DRA6 164 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 C11orf88Q6PI97 169 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 Q6ZSV7 163 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 SELENOHQ8IZQ5 122 aaKnown RBP6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 C5orf56Q8N8D9 126 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 DMBX1Q8NFW5 382 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 NPBQ8NG41 125 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 GLYATL2Q8WU03 294 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 TSNAXQ99598 290 aaKnown RBP6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 HSPB9Q9BQS6 159 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 RANBP3Q9H6Z4 567 aaPredicted RBP6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 LIN7CQ9NUP9 197 aaKnown RBP6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 C1RLQ9NZP8 487 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 KIAA1456Q9P272 454 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 KCNIP3Q9Y2W7 256 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 NUBP2Q9Y5Y2 271 aa6.89□□□□□ -1.31
CLTCL1-204ENST00000458188 A0A0A6YYJ9 748 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 C9orf170A2RU37 121 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 INMT-MINDY4F8WBC2 141 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 CA2P00918 260 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 HRASP01112 189 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 IGKV1-5P01602 117 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 CRYGBP07316 175 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 OR9G9P0C7N8 305 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 APELAP0DMC3 54 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 LGALS7P47929 136 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 DHODHQ02127 395 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 C5orf64Q2M2E5 130 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 MRGPRG-AS1Q2M3A8 158 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 VMA21Q3ZAQ7 101 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 TMEM128Q5BJH2 165 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 ARSJQ5FYB0 599 aaPredicted RBP6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 TMEM268Q5VZI3 342 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 OR4A47Q6IF82 309 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 PLET1Q6UQ28 207 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 LYZL2Q7Z4W2 148 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 ZNF695Q8IW36 515 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 FAM71E2Q8N5Q1 922 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 UXS1Q8NBZ7 420 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 DUSP18Q8NEJ0 188 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 OSR1Q8TAX0 266 aaPredicted RBP6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 CD300LFQ8TDQ1 290 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 RHOVQ96L33 236 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 RNF5Q99942 180 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 FAM103A1Q9BTL3 118 aaKnown RBP6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 TMEM222Q9H0R3 208 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 TMEM140Q9NV12 185 aa6.88□□□□□ -1.31
CLTCL1-204ENST00000458188 A0A0G2JRQ6 117 aa6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 MARCH11A6NNE9 402 aa6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 RBFOX2O43251 390 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 OR2A4O95047 310 aa6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 NXPH3O95157 252 aa6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 NDUFA3O95167 84 aa6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 CNIH1O95406 144 aa6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 CDS2O95674 445 aa6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 HLA-AP01891 365 aaKnown RBP6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 HOXB5P09067 269 aa6.87□□□□□ -1.31
CLTCL1-204ENST00000458188 NQO2P16083 231 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms