RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 PPIAL4FP0DN26 164 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 LHX2P50458 406 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 PAX9P55771 341 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 Q6ZS49 121 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 UBALD1Q8TB05 177 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 DOCK7Q96N67 2140 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 NIT2Q9NQR4 276 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 TAAR3PQ9P1P4 343 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 CDC42EP3Q9UKI2 254 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 BOKQ9UMX3 212 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-207ENST00000458046 LOXL2Q9Y4K0 774 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 PPIAL4AQ9Y536 164 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 KIR2DS1A0A191URI9 304 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 PPP1R2P9O14990 202 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 MAGEA5P43359 124 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 KIR2DS4P43632 304 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 IER3P46695 156 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 KIR2DS1Q14954 304 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 PCSK4Q6UW60 755 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 OR2M7Q8NG81 312 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 APOBEC3DQ96AK3 386 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-207ENST00000458046 CD300LBA8K4G0 201 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 K7EN84 100 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 NEURL1O76050 574 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 OR8U8P0C7N1 319 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 PSG2P11465 335 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 RPS10P46783 165 aaKnown RBP9.89□□□□□ -0.83
SYNE2-207ENST00000458046 TMEM267Q0VDI3 215 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-207ENST00000458046 NCMAPQ5T1S8 102 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 AKR1C8PQ5T2L2 129 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 MRPL30Q8TCC3 161 aaKnown RBP9.89□□□□□ -0.83
SYNE2-207ENST00000458046 GPR146Q96CH1 333 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 RAB39BQ96DA2 213 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 C14orf144Q96I85 54 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 IGKV3D-15A0A087WSY6 115 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 IGHV3-64DA0A0J9YX35 117 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 SRP19P09132 144 aaKnown RBP9.88□□□□□ -0.83
SYNE2-207ENST00000458046 BMP5P22003 454 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 F2RP25116 425 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 CLDN18P56856 261 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 MPV17LQ2QL34 196 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 ZNF343Q6P1L6 599 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 CYB561D1Q8N8Q1 229 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 MRPL53Q96EL3 112 aaKnown RBP9.88□□□□□ -0.83
SYNE2-207ENST00000458046 TRAV24A0A0B4J272 114 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 A0A1B0GW64 132 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 FCN3O75636 299 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 SYNGR4O95473 234 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 S100A8P05109 93 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 RTP5Q14D33 572 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 WDR25Q64LD2 544 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-207ENST00000458046 Q6ZRM9 215 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 NUFIP2Q7Z417 695 aaKnown RBP9.88□□□□□ -0.83
SYNE2-207ENST00000458046 ZNF429Q86V71 674 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 SAXO1Q8IYX7 474 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 OR5A2Q8NGI9 324 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 GNPNAT1Q96EK6 184 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-207ENST00000458046 OR2V2Q96R30 315 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 OR1A1Q9P1Q5 309 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 METTL1Q9UBP6 276 aaKnown RBP9.88□□□□□ -0.83
SYNE2-207ENST00000458046 PCSK5Q92824 1860 aa9.88□□□□□ -0.83
SYNE2-207ENST00000458046 DOCK10Q96BY6 2186 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.87□□□□□ -0.83
SYNE2-207ENST00000458046 USP17L23D6RBM5 183 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 LAMTOR5O43504 91 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 IGHV2-5P01817 119 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 CA6P23280 308 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 ICAM4Q14773 271 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 SRSF7Q16629 238 aaKnown RBP eCLIP9.87□□□□□ -0.83
SYNE2-207ENST00000458046 SAMD5Q5TGI4 173 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 OR2T2Q6IF00 324 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 HAPLN4Q86UW8 402 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 OR5P3Q8WZ94 311 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 APH1AQ96BI3 265 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 FAM173AQ9BQD7 235 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 PCGF1Q9BSM1 259 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 NDUFAF3Q9BU61 184 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 LINC00470Q9BZP3 86 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 ZNF703Q9H7S9 590 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-207ENST00000458046 OR2W1Q9Y3N9 320 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 DNAJC13O75165 2243 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 AP4M1O00189 453 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 DLK1P80370 383 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 GABRA6Q16445 453 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 ZNF324BQ6AW86 544 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-207ENST00000458046 HEPN1Q6WQI6 88 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 ATP5SQ99766 215 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 SEBOXQ9HB31 216 aaPredicted RBP9.87□□□□□ -0.83
SYNE2-207ENST00000458046 WSB1Q9Y6I7 421 aa9.87□□□□□ -0.83
SYNE2-207ENST00000458046 HELZ2Q9BYK8 2649 aaKnown RBP9.86□□□□□ -0.83
SYNE2-207ENST00000458046 DLEU1O43261 78 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 IFNA17P01571 189 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 IAPPP10997 89 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 TDGF1P13385 188 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 PLP2Q04941 152 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 BAXQ07812 192 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 MUCL1Q96DR8 90 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 SMDT1Q9H4I9 107 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 TOX4O94842 621 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms