RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 A3GALT2U3KPV4 340 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 A0A1W2PN81 502 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 H3BMQ9 156 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 RBFOX2O43251 390 aaKnown RBP eCLIP13.5□□□□□ -0.25
USP39-208ENST00000455732 CREBL2O60519 120 aaPredicted RBP13.5□□□□□ -0.25
USP39-208ENST00000455732 PMP2P02689 132 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 SAA1P0DJI8 122 aaPredicted RBP13.5□□□□□ -0.25
USP39-208ENST00000455732 HRH1P35367 487 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 CHRNA7P36544 502 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 RAB9AP51151 201 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 FXYD4P59646 89 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 RUNX1Q01196 453 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 PRSS8Q16651 343 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 ACTBL2Q562R1 376 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 OR2B11Q5JQS5 317 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 ZNF818PQ6ZRF7 136 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 ZNF491Q8N8L2 437 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 LFNGQ8NES3 379 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 GRPEL2Q8TAA5 225 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 ISOC1Q96CN7 298 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 RCC1LQ96I51 464 aaKnown RBP13.5□□□□□ -0.25
USP39-208ENST00000455732 RAX2Q96IS3 184 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 TMEM68Q96MH6 324 aa13.5□□□□□ -0.25
USP39-208ENST00000455732 ZNF2Q9BSG1 426 aaPredicted RBP13.5□□□□□ -0.25
USP39-208ENST00000455732 CCL24O00175 119 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 DUS4LO95620 317 aaKnown RBP13.49□□□□□ -0.25
USP39-208ENST00000455732 HLA-DMAP28067 261 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 CATR1Q13166 79 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 FOXB2Q5VYV0 432 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 UNQ5815/PRO19632Q6UWF5 114 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 REC114Q7Z4M0 266 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 TMEM17Q86X19 198 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 LAX1Q8IWV1 398 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 DCUN1D5Q9BTE7 237 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 VSIG4Q9Y279 399 aa13.49□□□□□ -0.25
USP39-208ENST00000455732 TNFSF12O43508 249 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 CNIH1O95406 144 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 GNRHRP30968 328 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 GNB1P62873 340 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 FHL3Q13643 280 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 VAX1Q5SQQ9 334 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 IDO2Q6ZQW0 420 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 OR6F1Q8NGZ6 308 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 VSTM2AQ8TAG5 236 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 ABHD1Q96SE0 405 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 GPHA2Q96T91 129 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 FXYD6Q9H0Q3 95 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 SLA2Q9H6Q3 261 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 CEPT1Q9Y6K0 416 aa13.48□□□□□ -0.25
USP39-208ENST00000455732 H3BUA1 57 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 I3L521 148 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 CTDSP2O14595 271 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 RGS5O15539 181 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 BRI3O95415 125 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 MMD2Q8IY49 270 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 SPAG16Q8N0X2 631 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 PUSL1Q8N0Z8 303 aaKnown RBP13.47□□□□□ -0.25
USP39-208ENST00000455732 OR52I2Q8NH67 350 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 SLIRPQ9GZT3 109 aaKnown RBP13.47□□□□□ -0.25
USP39-208ENST00000455732 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
USP39-208ENST00000455732 GNB4Q9HAV0 340 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 AURKAIP1Q9NWT8 199 aaPredicted RBP13.47□□□□□ -0.25
USP39-208ENST00000455732 MTFP1Q9UDX5 166 aa13.47□□□□□ -0.25
USP39-208ENST00000455732 TNCP24821 2201 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 RAMP3O60896 148 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 HRASP01112 189 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 TBPP20226 339 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 CD40LGP29965 261 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 MRPS10P82664 201 aaKnown RBP13.46□□□□□ -0.25
USP39-208ENST00000455732 DEFB136Q30KP8 78 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 ASPHD1Q5U4P2 390 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 POC5Q8NA72 575 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 CD300LFQ8TDQ1 290 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 SRSF12Q8WXF0 261 aaKnown RBP13.46□□□□□ -0.25
USP39-208ENST00000455732 RHOVQ96L33 236 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 AIFM2Q9BRQ8 373 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 GPR61Q9BZJ8 451 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 RABL2AQ9UBK7 228 aaPredicted RBP13.46□□□□□ -0.25
USP39-208ENST00000455732 RABL2BQ9UNT1 228 aa13.46□□□□□ -0.25
USP39-208ENST00000455732 KBTBD11O94819 623 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 OR2A4O95047 310 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 TAS2R31P59538 309 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 TSPAN5P62079 268 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 TNXAQ16473 311 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 POU2AF1Q16633 256 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 AADACL3Q5VUY0 350 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 CMTM1Q8IZ96 169 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 VKORC1L1Q8N0U8 176 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 TMEM167AQ8TBQ9 72 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 DUX3Q96PT4 197 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 OR2A7Q96R45 310 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 MCRIP2Q9BUT9 160 aaKnown RBP13.45□□□□□ -0.26
USP39-208ENST00000455732 NXF2Q9GZY0 626 aaKnown RBP13.45□□□□□ -0.26
USP39-208ENST00000455732 PLEKHA2Q9HB19 425 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 KLK11Q9UBX7 282 aa13.45□□□□□ -0.26
USP39-208ENST00000455732 GABARAPH6UMI1 98 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 GPR31O00270 319 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 PGLYRP1O75594 196 aaPredicted RBP13.44□□□□□ -0.26
USP39-208ENST00000455732 ACTL6BO94805 426 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 HPRT1P00492 218 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms