RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 AADACP22760 399 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 PSMD7P51665 324 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 RHOGP84095 191 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 CDNFQ49AH0 187 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 OR2B11Q5JQS5 317 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 NUDCD2Q8WVJ2 157 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 USMG5Q96IX5 58 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 WFDC10AQ9H1F0 79 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 SELENOKQ9Y6D0 94 aa12.13□□□□□ -0.47
GPC1-206ENST00000455111 CGB1A6NKQ9 187 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 PDCD5O14737 125 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
GPC1-206ENST00000455111 RRASP10301 218 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 PTHLHP12272 177 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 DTYMKP23919 212 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 ARFRP1Q13795 201 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 CDK10Q15131 360 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 RTL8BQ17RB0 113 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 VMA21Q3ZAQ7 101 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 SGPP2Q8IWX5 399 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 TTC9CQ8N5M4 171 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 ZNF645Q8N7E2 425 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 OSR1Q8TAX0 266 aaPredicted RBP12.12□□□□□ -0.47
GPC1-206ENST00000455111 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 PHB2Q99623 299 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 GINS4Q9BRT9 223 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 ATG5Q9H1Y0 275 aa12.12□□□□□ -0.47
GPC1-206ENST00000455111 TXNL4BQ9NX01 149 aaKnown RBP12.12□□□□□ -0.47
GPC1-206ENST00000455111 RBMX2Q9Y388 322 aaKnown RBP12.12□□□□□ -0.47
GPC1-206ENST00000455111 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.11□□□□□ -0.47
GPC1-206ENST00000455111 TMEM235A6NFC5 223 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 FCGR3BO75015 233 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 OR2A4O95047 310 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 HLA-AP01891 365 aaKnown RBP12.11□□□□□ -0.47
GPC1-206ENST00000455111 CD7P09564 240 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 GADD45AP24522 165 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 MRPS15P82914 257 aaKnown RBP12.11□□□□□ -0.47
GPC1-206ENST00000455111 EXOSC2Q13868 293 aaKnown RBP12.11□□□□□ -0.47
GPC1-206ENST00000455111 UBE2UQ5VVX9 321 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 HACD4Q5VWC8 232 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 PUSL1Q8N0Z8 303 aaKnown RBP12.11□□□□□ -0.47
GPC1-206ENST00000455111 ADTRPQ96IZ2 230 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 RNF167Q9H6Y7 350 aa12.11□□□□□ -0.47
GPC1-206ENST00000455111 RBM7Q9Y580 266 aaKnown RBP12.11□□□□□ -0.47
GPC1-206ENST00000455111 TUSC2O75896 110 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 OR2J3O76001 311 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 CLEC2LP0C7M8 214 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 MYL9P24844 172 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 RPEL1Q2QD12 228 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 CD300EQ496F6 205 aaPredicted RBP12.1□□□□□ -0.47
GPC1-206ENST00000455111 ZNF773Q6PK81 442 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 SPARTQ8N0X7 666 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 Q8N402 240 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 CCDC140Q96MF4 163 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 FAM110AQ9BQ89 295 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 ST6GALNAC5Q9BVH7 336 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 HIPK2Q9H2X6 1198 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 PLEKHA3Q9HB20 300 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 OR2W1Q9Y3N9 320 aa12.1□□□□□ -0.47
GPC1-206ENST00000455111 RBMY1BA6NDE4 496 aaKnown RBP12.09□□□□□ -0.47
GPC1-206ENST00000455111 RBMY1EA6NEQ0 496 aaKnown RBP12.09□□□□□ -0.47
GPC1-206ENST00000455111 H0Y980 276 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 NDUFB8O95169 186 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 RBMY1DP0C7P1 496 aaKnown RBP12.09□□□□□ -0.47
GPC1-206ENST00000455111 AREGP15514 252 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 GALP22466 123 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 FGF9P31371 208 aaPredicted RBP12.09□□□□□ -0.47
GPC1-206ENST00000455111 KLK9Q2XQG4 91 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 KCTD9Q7L273 389 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 OR5H6Q8NGV6 325 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 CACNG8Q8WXS5 425 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 SLC25A38Q96DW6 304 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 SPATA25Q9BR10 227 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 KLK9Q9UKQ9 250 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 S4R3C0 116 aa12.09□□□□□ -0.47
GPC1-206ENST00000455111 METTL21EPA6NDL7 271 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 FAM223BA6NKX1 122 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 NOTOA8MTQ0 251 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 IGHV3-23P01764 117 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 TALDO1P37837 337 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 ATP5G2Q06055 141 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 DEFB114Q30KQ6 69 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 LCN12Q6JVE5 192 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 FAM223AQ8IWN6 122 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 DEFB125Q8N687 156 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 TMEM167AQ8TBQ9 72 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 LGALS14Q8TCE9 139 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 SNAPC3Q92966 411 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 OR51E2Q9H255 320 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 ZC4H2Q9NQZ6 224 aa12.08□□□□□ -0.48
GPC1-206ENST00000455111 C2orf70A6NJV1 201 aa12.07□□□□□ -0.48
GPC1-206ENST00000455111 KBTBD11O94819 623 aa12.07□□□□□ -0.48
GPC1-206ENST00000455111 OR2C1O95371 312 aa12.07□□□□□ -0.48
GPC1-206ENST00000455111 ZNF735P0CB33 412 aa12.07□□□□□ -0.48
GPC1-206ENST00000455111 GABARAPL2P60520 117 aa12.07□□□□□ -0.48
GPC1-206ENST00000455111 CBX3Q13185 183 aa12.07□□□□□ -0.48
GPC1-206ENST00000455111 C15orf32Q32M92 178 aa12.07□□□□□ -0.48
GPC1-206ENST00000455111 CNIH2Q6PI25 160 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms