RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 WDR83OSQ9Y284 106 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 PUS1Q9Y606 427 aaKnown RBP eCLIP14.97□□□□□ -0.01
MECP2-205ENST00000453960 EPG5Q9HCE0 2579 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 CTXND1A0A1B0GTU2 59 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 A0A1W2PPH5 198 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 C17orf100A8MU93 164 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 DAOP14920 347 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 TMEM249Q2WGJ8 235 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 LCN15Q6UWW0 184 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 NPCDR1Q9BY65 106 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 GNG13Q9P2W3 67 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 VAX2Q9UIW0 290 aa14.97□□□□□ -0.01
MECP2-205ENST00000453960 TPRP12270 2363 aaKnown RBP14.96□□□□□ -0.01
MECP2-205ENST00000453960 CACNA1BQ00975 2339 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 SAA2-SAA4A0A096LPE2 208 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 B4DEV8 164 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 FBP1P09467 338 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 SAA2P0DJI9 122 aaPredicted RBP14.96□□□□□ -0.01
MECP2-205ENST00000453960 TNFRSF1AP19438 455 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 FGF7P21781 194 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 TAGLN2P37802 199 aaKnown RBP14.96□□□□□ -0.01
MECP2-205ENST00000453960 AKIRIN2Q53H80 203 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 PRAMEF5Q5TYX0 476 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 GFRALQ6UXV0 394 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 C1QL4Q86Z23 238 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 NIPSNAP3BQ9BS92 247 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 SIRT7Q9NRC8 400 aa14.96□□□□□ -0.01
MECP2-205ENST00000453960 A0A1W2PPE2 198 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 CXorf65A6NEN9 183 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 TNFRSF13BO14836 293 aaPredicted RBP14.95□□□□□ -0.02
MECP2-205ENST00000453960 IFNA1P01562 189 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 RAB5AP20339 215 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 RAB5BP61020 215 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 ERVK-16P61578 105 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 PNRC1Q12796 327 aaPredicted RBP14.95□□□□□ -0.02
MECP2-205ENST00000453960 SLC25A48Q6ZT89 311 aaKnown RBP14.95□□□□□ -0.02
MECP2-205ENST00000453960 RP1L1Q8IWN7 2480 aaPredicted RBP14.95□□□□□ -0.02
MECP2-205ENST00000453960 OR4A16Q8NH70 328 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 ISOC2Q96AB3 205 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 CCL13Q99616 98 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 TMEM140Q9NV12 185 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 RPUSD1Q9UJJ7 312 aaKnown RBP14.95□□□□□ -0.02
MECP2-205ENST00000453960 NBEAQ8NFP9 2946 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 RPP30P78346 268 aaKnown RBP14.95□□□□□ -0.02
MECP2-205ENST00000453960 DLK1P80370 383 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 MEF2CQ06413 473 aaPredicted RBP14.95□□□□□ -0.02
MECP2-205ENST00000453960 BSPH1Q075Z2 132 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 TFF3Q07654 80 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 LINC00518Q8N0U6 118 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 SLC39A9Q9NUM3 307 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 PRELID1Q9Y255 219 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 FOXA2Q9Y261 457 aaPredicted RBP14.95□□□□□ -0.02
MECP2-205ENST00000453960 LINC00312Q9Y6C7 94 aa14.95□□□□□ -0.02
MECP2-205ENST00000453960 C15orf61A6NNL5 157 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 C1orf196B1AJZ1 125 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 SEC14L6B5MCN3 397 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 MPDU1O75352 247 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 RBMXL2O75526 392 aaKnown RBP14.94□□□□□ -0.02
MECP2-205ENST00000453960 GYPAP02724 150 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 IFNA4P05014 189 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 OR4A8P0C604 315 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 IRF2P14316 349 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 FGF8P55075 233 aaPredicted RBP14.94□□□□□ -0.02
MECP2-205ENST00000453960 ELLP55199 621 aaPredicted RBP14.94□□□□□ -0.02
MECP2-205ENST00000453960 OR2B8PP59922 312 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 HEPN1Q6WQI6 88 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 RBMS3Q6XE24 437 aaKnown RBP14.94□□□□□ -0.02
MECP2-205ENST00000453960 TGIF2LYQ8IUE0 185 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 FAM216BQ8N7L0 139 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 ZNF383Q8NA42 475 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 PLPPR2Q96GM1 343 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 SAV1Q9H4B6 383 aaPredicted RBP14.94□□□□□ -0.02
MECP2-205ENST00000453960 TMEM14BQ9NUH8 114 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 TMEM242Q9NWH2 141 aa14.94□□□□□ -0.02
MECP2-205ENST00000453960 KMT2BQ9UMN6 2715 aaPredicted RBP14.94□□□□□ -0.02
MECP2-205ENST00000453960 ACACBO00763 2458 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 OR2C1O95371 312 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 IFNA17P01571 189 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 MRPS11P82912 194 aaKnown RBP14.93□□□□□ -0.02
MECP2-205ENST00000453960 WFDC8Q8IUA0 241 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 TMEM170AQ8WVE7 144 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 LHX4Q969G2 390 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 SNRNP40Q96DI7 357 aaKnown RBP14.93□□□□□ -0.02
MECP2-205ENST00000453960 DCAF16Q9NXF7 216 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 TCF19Q9Y242 345 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 ATMQ13315 3056 aa14.93□□□□□ -0.02
MECP2-205ENST00000453960 TRAV3A0A0B4J244 114 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 hADV38S2A0JD32 116 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 ZFP92A6NM28 416 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 C17orf112F2Z3M2 114 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 FAM24BQ8N5W8 94 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 OR10G9Q8NGN4 311 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 OR10G7Q8NGN6 311 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 ZCCHC14Q8WYQ9 949 aaKnown RBP14.92□□□□□ -0.02
MECP2-205ENST00000453960 RAB1CQ92928 201 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 ACTR3CQ9C0K3 210 aaPredicted RBP14.92□□□□□ -0.02
MECP2-205ENST00000453960 TRAV38-1A0A0B4J264 116 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 CD1BP29016 333 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 CD81P60033 236 aa14.92□□□□□ -0.02
MECP2-205ENST00000453960 SPINK9Q5DT21 86 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms