RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 BORCS5Q969J3 196 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 CPNE2Q96FN4 548 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 ANKRD36BP1Q96IX9 119 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 BMFQ96LC9 184 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 GINS3Q9BRX5 216 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 CMTM6Q9NX76 183 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 OR12D3Q9UGF7 316 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 PYCARDQ9ULZ3 195 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 C14orf166Q9Y224 244 aaKnown RBP2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 POMPQ9Y244 141 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 FIS1Q9Y3D6 152 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 HDGFL3Q9Y3E1 203 aa2.59□□□□□ -1.99
HMGB1P15-201ENST00000453854 TET2Q6N021 2002 aaPredicted RBP2.59□□□□□ -2
HMGB1P15-201ENST00000453854 ZNFX1Q9P2E3 1918 aaKnown RBP2.58□□□□□ -2
HMGB1P15-201ENST00000453854 MCM3APO60318 1980 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 SCN2AQ99250 2005 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 A0A0X1KG70 313 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 GMNCA6NCL1 334 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 OR4C46A6NHA9 309 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 C9JQL5 133 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 K7EQS6 105 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 BHLHE40O14503 412 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 OR12D1P0DN82 309 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 CD34P28906 385 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 REG1BP48304 166 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 INPP1P49441 399 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 GTF2A1P52655 376 aaPredicted RBP2.58□□□□□ -2
HMGB1P15-201ENST00000453854 HSPE1P61604 102 aaKnown RBP2.58□□□□□ -2
HMGB1P15-201ENST00000453854 LYZP61626 148 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 PPP1CAP62136 330 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 NDPQ00604 133 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 ERCC8Q13216 396 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 APOFQ13790 326 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 TMEM183BQ1AE95 376 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 LINC00303Q3SY05 128 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 HENMT1Q5T8I9 393 aaKnown RBP2.58□□□□□ -2
HMGB1P15-201ENST00000453854 LPCAT3Q6P1A2 487 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 GUSBP11Q6P575 273 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 IGFL2Q6UWQ7 119 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 Q6ZRU5 148 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 LINC00596Q86U02 117 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 TMEM183AQ8IXX5 376 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 C20orf196Q8IYI0 205 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 UBL4BQ8N7F7 174 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 DCAF4L2Q8NA75 395 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 OR51A2Q8NGJ7 313 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 OR8S1Q8NH09 359 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 OR1L1Q8NH94 360 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 IMMP1LQ96LU5 166 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 CAMK2N2Q96S95 79 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 KLF6Q99612 283 aaPredicted RBP2.58□□□□□ -2
HMGB1P15-201ENST00000453854 SLC17A9Q9BYT1 436 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 TBL1XR1Q9BZK7 514 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 RBM12B-AS1Q9P1G2 102 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 NYAP2Q9P242 653 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 GINS2Q9Y248 185 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 WASHC3Q9Y3C0 194 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 UFC1Q9Y3C8 167 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 HSPB11Q9Y547 144 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 TEP1Q99973 2627 aaKnown RBP2.58□□□□□ -2
HMGB1P15-201ENST00000453854 KIAA1671Q9BY89 1806 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 ITPR1Q14643 2758 aa2.58□□□□□ -2
HMGB1P15-201ENST00000453854 EP300Q09472 2414 aaPredicted RBP2.58□□□□□ -2
HMGB1P15-201ENST00000453854 TENM4Q6N022 2769 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 IGF2RP11717 2491 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 TRAV8-1A0A0A6YYK1 113 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 A0A1B0GVY2 172 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 EXOC1LA0A1B0GW35 172 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 M0QZK8 103 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 PDE6DO43924 150 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 SLC25A14O95258 325 aaPredicted RBP2.57□□□□□ -2
HMGB1P15-201ENST00000453854 IGLV2-23P01705 113 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 REG1AP05451 166 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 SOD3P08294 240 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 FAM228BP0C875 321 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 C1GALT1C1LP0DN25 315 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 CTSEP14091 401 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 IMPA1P29218 277 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 CRABP1P29762 137 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 MPIP34949 423 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 NMUP48645 174 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 MP68P56378 58 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 KRTAP10-3P60369 221 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 SNAP25P60880 206 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 RAP1AP62834 184 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 FLI1Q01543 452 aaPredicted RBP2.57□□□□□ -2
HMGB1P15-201ENST00000453854 DAZ2Q13117 558 aaKnown RBP2.57□□□□□ -2
HMGB1P15-201ENST00000453854 ZNF79Q15937 498 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 FAM201AQ5SY85 155 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 NXNL2Q5VZ03 156 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 ZNF773Q6PK81 442 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 TBPL2Q6SJ96 375 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 TOMM20LQ6UXN7 152 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 ALKAL1Q6UXT8 129 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 ACP7Q6ZNF0 438 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 SHISA6Q6ZSJ9 500 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 SMIM20Q8N5G0 67 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 ZNF439Q8NDP4 499 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 OR8A1Q8NGG7 326 aa2.57□□□□□ -2
HMGB1P15-201ENST00000453854 OR52L1Q8NGH7 329 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms