RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 VBP1P61758 197 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 NCS1P62166 190 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 UBE2NLQ5JXB2 153 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 TMEM69Q5SWH9 247 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 C19orf35Q6ZS72 473 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 SSX9Q7RTT3 188 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 HOGA1Q86XE5 327 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 OR13F1Q8NGS4 319 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 OSR1Q8TAX0 266 aaPredicted RBP7.47□□□□□ -1.21
USP54-207ENST00000451492 SNAPC3Q92966 411 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 AUNIPQ9H7T9 357 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 ZNF430Q9H8G1 570 aaPredicted RBP7.47□□□□□ -1.21
USP54-207ENST00000451492 CCL28Q9NRJ3 127 aa7.47□□□□□ -1.21
USP54-207ENST00000451492 ZNF256Q9Y2P7 627 aaPredicted RBP7.47□□□□□ -1.21
USP54-207ENST00000451492 RAMP3O60896 148 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 ACTL6BO94805 426 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 PPYP01298 95 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 HSPB1P04792 205 aaKnown RBP7.46□□□□□ -1.22
USP54-207ENST00000451492 TAS2R20P59543 309 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 CDK10Q15131 360 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 PRSS8Q16651 343 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 MRGPRG-AS1Q2M3A8 158 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 MFSD4AQ8N468 514 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 TEX45Q8NA69 505 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 OR4S2Q8NH73 311 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 RHOVQ96L33 236 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 ASCL2Q99929 193 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 B9D2Q9BPU9 175 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 FUNDC2Q9BWH2 189 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 SLC5A7Q9GZV3 580 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 EHFQ9NZC4 300 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 COMMD3Q9UBI1 195 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 ZMAT5Q9UDW3 170 aaKnown RBP7.46□□□□□ -1.22
USP54-207ENST00000451492 ADAM30Q9UKF2 790 aa7.46□□□□□ -1.22
USP54-207ENST00000451492 A0A0A6YYH2 397 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 HMX3A6NHT5 357 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 A6NJ64 397 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 H3BUA1 57 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 SULT1C2O00338 296 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 XRCC3O43542 346 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 SLC22A5O76082 557 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 KBTBD11O94819 623 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 TRBV12-3P01733 135 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 PMP2P02689 132 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 EIF4EP06730 217 aaKnown RBP7.45□□□□□ -1.22
USP54-207ENST00000451492 MYOD1P15172 320 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 RPA2P15927 270 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 HERV-K104P61576 105 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 RNASE12Q5GAN4 147 aaKnown RBP7.45□□□□□ -1.22
USP54-207ENST00000451492 OVCH2Q7RTZ1 564 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 CROCCP3Q8IVE0 287 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 OR5AP2Q8NGF4 316 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 OR51H1Q8NH63 302 aa7.45□□□□□ -1.22
USP54-207ENST00000451492 S100A16Q96FQ6 103 aaKnown RBP7.45□□□□□ -1.22
USP54-207ENST00000451492 FYTTD1Q96QD9 318 aaKnown RBP7.45□□□□□ -1.22
USP54-207ENST00000451492 HSD17B10Q99714 261 aaKnown RBP7.45□□□□□ -1.22
USP54-207ENST00000451492 TINAGL1Q9GZM7 467 aaPredicted RBP7.45□□□□□ -1.22
USP54-207ENST00000451492 A0A0G2JLM5 398 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 DPPA5A6NC42 116 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 CREBL2O60519 120 aaPredicted RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 RBMXL2O75526 392 aaKnown RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 REG1AP05451 166 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 OR9G9P0C7N8 305 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 SPNP16150 400 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 CBX5P45973 191 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 RFX2P48378 723 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 EIF4EBP1Q13541 118 aaPredicted RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 DCTN2Q13561 401 aaKnown RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 DYRK1AQ13627 763 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 EXOSC2Q13868 293 aaKnown RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 ACSM6Q6P461 480 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 ZNF818PQ6ZRF7 136 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 ZNF429Q86V71 674 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 MMD2Q8IY49 270 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 SPAG16Q8N0X2 631 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 ADAD2Q8NCV1 583 aaKnown RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 SLC25A46Q96AG3 418 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 OR4C12Q96R67 309 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 ZNF2Q9BSG1 426 aaPredicted RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 NAA50Q9GZZ1 169 aaKnown RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 RANGRFQ9HD47 186 aaPredicted RBP7.44□□□□□ -1.22
USP54-207ENST00000451492 HRASLSQ9HDD0 168 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 S4R3C0 116 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 TNCP24821 2201 aa7.44□□□□□ -1.22
USP54-207ENST00000451492 FAM25AB3EWG3 89 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 FAM25CB3EWG5 89 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 FAM25GB3EWG6 89 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 OR2J3O76001 311 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 OR2A4O95047 310 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 IGHV3-23P01764 117 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 RLN1P04808 185 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 GP9P14770 177 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 HLA-DMAP28067 261 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 RPL27AP46776 148 aaKnown RBP7.43□□□□□ -1.22
USP54-207ENST00000451492 INSL3P51460 131 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 SYNJ2BPP57105 145 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 BRWD1-AS2P59051 145 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 RHOGP84095 191 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 ZNF45Q02386 682 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 CATR1Q13166 79 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms