RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	NFYA	P23511	347 aa	Predicted RBP	12.35	□□□□□ -0.43
SGCE-208	ENST00000450385	OR5T1	Q8NG75	326 aa		12.35	□□□□□ -0.43
SGCE-208	ENST00000450385	KCTD12	Q96CX2	325 aa	Known RBP	12.35	□□□□□ -0.43
SGCE-208	ENST00000450385	SLC25A38	Q96DW6	304 aa		12.35	□□□□□ -0.43
SGCE-208	ENST00000450385	OR4C12	Q96R67	309 aa		12.35	□□□□□ -0.43
SGCE-208	ENST00000450385	DCUN1D5	Q9BTE7	237 aa		12.35	□□□□□ -0.43
SGCE-208	ENST00000450385	IGHV4OR15-8	A0A075B7B6	117 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385		A0A087WW49	117 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	FAM223B	A6NKX1	122 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	FCGR3B	O75015	233 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	SAP30	O75446	220 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	HRAS	P01112	189 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	IGLV2-14	P01704	120 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	MRGPRG-AS1	Q2M3A8	158 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	ZNF343	Q6P1L6	599 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	FAM223A	Q8IWN6	122 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	MFSD4A	Q8N468	514 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	TSPAN14	Q8NG11	270 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	GIMAP1	Q8WWP7	306 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	SRSF12	Q8WXF0	261 aa	Known RBP	12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	CMTM3	Q96MX0	182 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	PHB2	Q99623	299 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	ALX4	Q9H161	411 aa	Predicted RBP	12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	AUNIP	Q9H7T9	357 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	SIGLEC8	Q9NYZ4	499 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	SMAD5-AS1	Q9Y6J3	95 aa		12.34	□□□□□ -0.43
SGCE-208	ENST00000450385	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	AIRE	O43918	545 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	OR2A4	O95047	310 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	IGHV3-11	P01762	117 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	CLEC2L	P0C7M8	214 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	SLURP1	P55000	103 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	KLF5	Q13887	457 aa	Predicted RBP	12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	TNXA	Q16473	311 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	TTC9C	Q8N5M4	171 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	ADAD2	Q8NCV1	583 aa	Known RBP	12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	OR5AP2	Q8NGF4	316 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	OR5H6	Q8NGV6	325 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	CD300LF	Q8TDQ1	290 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	CASTOR1	Q8WTX7	329 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	WWC2-AS2	Q96NR7	200 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	OR2A7	Q96R45	310 aa		12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	ZNF430	Q9H8G1	570 aa	Predicted RBP	12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	PEF1	Q9UBV8	284 aa	Known RBP	12.33	□□□□□ -0.44
SGCE-208	ENST00000450385	TRBV9	A0A0B4J1U6	114 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	IGKV1D-13	A0A0B4J2D9	117 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	MPPED1	O15442	326 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	SAA1	P0DJI8	122 aa	Predicted RBP	12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	IGKV1-13	P0DP09	117 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	UBE2NL	Q5JXB2	153 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	OR4A5	Q8NH83	315 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	SNAPC3	Q92966	411 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	YIPF6	Q96EC8	236 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	PRR25	Q96S07	402 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	RNF167	Q9H6Y7	350 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	COA4	Q9NYJ1	87 aa		12.32	□□□□□ -0.44
SGCE-208	ENST00000450385	LY86	O95711	162 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	DHFR	P00374	187 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	FCGR2C	P31995	323 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	CATR1	Q13166	79 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	DHRS11	Q6UWP2	260 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	PUSL1	Q8N0Z8	303 aa	Known RBP	12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	CADM3	Q8N126	398 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	NECAP1	Q8NC96	275 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	TMEM167A	Q8TBQ9	72 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	TCTEX1D2	Q8WW35	142 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	ACOT12	Q8WYK0	555 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	ZNF257	Q9Y2Q1	563 aa		12.31	□□□□□ -0.44
SGCE-208	ENST00000450385	TRIM64C	A6NLI5	447 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385		H0Y980	276 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	KBTBD11	O94819	623 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	PPY	P01298	95 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	IGLV1-51	P01701	117 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	RPS19	P39019	145 aa	Known RBP	12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	RPL30	P62888	115 aa	Known RBP	12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	KLK9	Q2XQG4	91 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	IDO2	Q6ZQW0	420 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	ANKRD13B	Q86YJ7	626 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	OR13F1	Q8NGS4	319 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	SRSF8	Q9BRL6	282 aa	Known RBP	12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	BET1L	Q9NYM9	111 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	KLK9	Q9UKQ9	250 aa		12.3	□□□□□ -0.44
SGCE-208	ENST00000450385	TENM3	Q9P273	2699 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	NPIPB5	A8MRT5	1133 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385		J3QRK9	145 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	GP9	P14770	177 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	NAT1	P18440	290 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	TAS2R31	P59538	309 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	TAS2R46	P59540	309 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	ATP5G2	Q06055	141 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	DYRK1A	Q13627	763 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	POU2AF1	Q16633	256 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	GVQW1	Q8N7I0	195 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	OR9G4	Q8NGQ1	327 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	SECTM1	Q8WVN6	248 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	SLC25A46	Q96AG3	418 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	IFT46	Q9NQC8	304 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	SLC2A9	Q9NRM0	540 aa		12.29	□□□□□ -0.44
SGCE-208	ENST00000450385	PEMT	Q9UBM1	199 aa		12.29	□□□□□ -0.44

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