RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ARHGDIBP52566 201 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 ABCA11PQ4W5N1 156 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 TPTE2P1Q5T6R2 138 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 FAM71F2Q6NXP2 309 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 SLC25A42Q86VD7 318 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 C1QL4Q86Z23 238 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 OR52B4Q8NGK2 314 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 MARCH1Q8TCQ1 289 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 RPEQ96AT9 228 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 OOSP1A8MZH6 123 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 GPR31O00270 319 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 HSD17B6O14756 317 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 TXNL1O43396 289 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 TSC22D2O75157 780 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 GAPDHP04406 335 aaKnown RBP13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 BRS3P32247 399 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 ZNF137PP52743 207 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 NSUN5P1Q3KNT7 163 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 LAMTOR1Q6IAA8 161 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 CCDC144NLQ6NUI1 221 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 LYG2Q86SG7 212 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 CCDC71LQ8N9Z2 235 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 OR13C8Q8NGS7 320 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 PHB2Q99623 299 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 RSRP1Q9BUV0 290 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 CCL28Q9NRJ3 127 aa13.59□□□□□ -0.23
PRPF40A-204ENST00000450303 NOTCH1P46531 2555 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 SAA2-SAA4A0A096LPE2 208 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 SH2D7A6NKC9 451 aaPredicted RBP13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 LY6LH3BQJ8 138 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 FBXO24O75426 580 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 CTSDP07339 412 aaPredicted RBP13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 SAA2P0DJI9 122 aaPredicted RBP13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 DHODHQ02127 395 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 FGL1Q08830 312 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 TGIF2LXQ8IUE1 241 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 DRAM1Q8N682 238 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 ADTRPQ96IZ2 230 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 SDHAF2Q9NX18 166 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 GPR132Q9UNW8 380 aa13.58□□□□□ -0.24
PRPF40A-204ENST00000450303 L7N2F9 121 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 HLA-AP01891 365 aaKnown RBP13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 GNRHRP30968 328 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 VDAC2P45880 294 aaPredicted RBP13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 ZNF816Q0VGE8 651 aaPredicted RBP13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 CATR1Q13166 79 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 DIAPH2-AS1Q14236 149 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 ZNF66Q6ZN08 573 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 ZNF818PQ6ZRF7 136 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 ZNF833PQ6ZTB9 187 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 ODF3L1Q8IXM7 274 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 OR8H3Q8N146 312 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 BVESQ8NE79 360 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 OR8H1Q8NGG4 311 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 HSD17B10Q99714 261 aaKnown RBP13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 SLC25A33Q9BSK2 321 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 WNT10AQ9GZT5 417 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 COMMD9Q9P000 198 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 VSIG4Q9Y279 399 aa13.57□□□□□ -0.24
PRPF40A-204ENST00000450303 M0R1X1 148 aa13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 IFNA7P01567 189 aa13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 THBS3P49746 956 aa13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 RND3P61587 244 aa13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 DHRS2Q13268 280 aa13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 PDLIM3Q53GG5 364 aaPredicted RBP13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 RPL39P5Q59GN2 51 aa13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 Q5BKY6 102 aa13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 ST6GALNAC6Q969X2 333 aa13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 CITED2Q99967 270 aaPredicted RBP13.56□□□□□ -0.24
PRPF40A-204ENST00000450303 HMSDA8MTL9 139 aa13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 PIGPP57054 158 aa13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 TAGLNQ01995 201 aaKnown RBP13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 PHLDA2Q53GA4 152 aa13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 OR11H4Q8NGC9 324 aa13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 WIPF2Q8TF74 440 aaPredicted RBP13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 RTN4IP1Q8WWV3 396 aaPredicted RBP13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 MRGPRFQ96AM1 343 aa13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 RBM14Q96PK6 669 aaKnown RBP13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 PDCD10Q9BUL8 212 aa13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 PRELID3BQ9Y3B1 194 aa13.55□□□□□ -0.24
PRPF40A-204ENST00000450303 PLXNB1O43157 2135 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 TEX13DA0A0J9YY54 714 aaPredicted RBP13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 PGLYRP1O75594 196 aaPredicted RBP13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 OR2F2O95006 317 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 DUS4LO95620 317 aaKnown RBP13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 VAMP1P23763 118 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 C9orf152Q5JTZ5 239 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 C16orf82Q7Z2V1 217 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 MOB3BQ86TA1 216 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 SGPP2Q8IWX5 399 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 OR5M8Q8NGP6 311 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 COQ8AQ8NI60 647 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 ZNF251Q9BRH9 671 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 RTBDNQ9BSG5 229 aaPredicted RBP13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 C5orf66Q9H5L9 145 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 SLC2A9Q9NRM0 540 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 KCNIP3Q9Y2W7 256 aa13.54□□□□□ -0.24
PRPF40A-204ENST00000450303 A0A0B4J2A0 478 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 IGHV1-3A0A0C4DH29 117 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms