RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 SPCS2Q15005 226 aa12.74□□□□□ -0.37
RAB11FIP3-204ENST00000449879 HAPLN4Q86UW8 402 aa12.74□□□□□ -0.37
RAB11FIP3-204ENST00000449879 HOGA1Q86XE5 327 aa12.74□□□□□ -0.37
RAB11FIP3-204ENST00000449879 PDPNQ86YL7 162 aa12.74□□□□□ -0.37
RAB11FIP3-204ENST00000449879 GVQW1Q8N7I0 195 aa12.74□□□□□ -0.37
RAB11FIP3-204ENST00000449879 ELOVL1Q9BW60 279 aa12.74□□□□□ -0.37
RAB11FIP3-204ENST00000449879 IFT46Q9NQC8 304 aa12.74□□□□□ -0.37
RAB11FIP3-204ENST00000449879 SLC35D1Q9NTN3 355 aa12.74□□□□□ -0.37
RAB11FIP3-204ENST00000449879 RYR3Q15413 4870 aa12.73□□□□□ -0.37
RAB11FIP3-204ENST00000449879 C13orf42A0A1B0GVH6 325 aa12.73□□□□□ -0.37
RAB11FIP3-204ENST00000449879 HPGDSO60760 199 aa12.73□□□□□ -0.37
RAB11FIP3-204ENST00000449879 PJVKQ0ZLH3 352 aa12.73□□□□□ -0.37
RAB11FIP3-204ENST00000449879 POC5Q8NA72 575 aa12.73□□□□□ -0.37
RAB11FIP3-204ENST00000449879 MUC7Q8TAX7 377 aa12.73□□□□□ -0.37
RAB11FIP3-204ENST00000449879 RSRP1Q9BUV0 290 aa12.73□□□□□ -0.37
RAB11FIP3-204ENST00000449879 RANGRFQ9HD47 186 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-204ENST00000449879 ANKRD34BA5PLL1 514 aa12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 FAM25AB3EWG3 89 aa12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 FAM25CB3EWG5 89 aa12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 FAM25GB3EWG6 89 aa12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 ELK1P19419 428 aa12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 NFYAP23511 347 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 ZMAT4Q9H898 229 aa12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 SDHAF2Q9NX18 166 aa12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 OR2W1Q9Y3N9 320 aa12.72□□□□□ -0.37
RAB11FIP3-204ENST00000449879 A0A0G2JLM5 398 aa12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 MEIS3P1A6NDR6 274 aa12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 IGLV2-23P01705 113 aa12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 PRSS3P35030 304 aa12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 LGALS7P47929 136 aa12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 SSBP2P81877 361 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 CASC10Q5T4H9 136 aa12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 SNAPC3Q92966 411 aa12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 ISOC1Q96CN7 298 aa12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 CCDC59Q9P031 241 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 MRPS7Q9Y2R9 242 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP3-204ENST00000449879 TNCP24821 2201 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 HUWE1Q7Z6Z7 4374 aaKnown RBP12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 H3BUA1 57 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 SLC22A5O76082 557 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 HLA-DQB1P01920 261 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 FCER2P06734 321 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 CRYGBP07316 175 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 ZP3P21754 424 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 ZNF645Q8N7E2 425 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 BVESQ8NE79 360 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 OR5AP2Q8NGF4 316 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 HARBI1Q96MB7 349 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 ANAPC10Q9UM13 185 aa12.7□□□□□ -0.38
RAB11FIP3-204ENST00000449879 SRRM4A7MD48 611 aaKnown RBP12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 H3BMQ9 156 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 J3QRK9 145 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 SHOXO15266 292 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 RGS5O15539 181 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 TUSC2O75896 110 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 IGLV1-51P01701 117 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 DEFA5Q01523 94 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 TAGLNQ01995 201 aaKnown RBP12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 CBX3Q13185 183 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 CDK10Q15131 360 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 SNX29P2Q8IUI4 249 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 Q8N1Y9 231 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 DYNC2LI1Q8TCX1 351 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 C5orf30Q96GV9 206 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 SCPEP1Q9HB40 452 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 ADAM30Q9UKF2 790 aa12.69□□□□□ -0.38
RAB11FIP3-204ENST00000449879 APELAP0DMC3 54 aa12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 LYL1P12980 280 aa12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 KLF5Q13887 457 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 GPX8Q8TED1 209 aa12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 ADTRPQ96IZ2 230 aa12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 TMEM68Q96MH6 324 aa12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 TINAGL1Q9GZM7 467 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 COA4Q9NYJ1 87 aa12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 EXTL2Q9UBQ6 330 aa12.68□□□□□ -0.38
RAB11FIP3-204ENST00000449879 TENM2Q9NT68 2774 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 IGKV1D-13A0A0B4J2D9 117 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 CCDC160A6NGH7 325 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 MSGN1A6NI15 193 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 SULT1C2O00338 296 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 PPYP01298 95 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 IGKV1-13P0DP09 117 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 NAT1P18440 290 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 FCGR2CP31995 323 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 DUTP33316 252 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 TAS2R46P59540 309 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 RTL8BQ17RB0 113 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 TMEM177Q53S58 311 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 OR9G4Q8NGQ1 327 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 PHB2Q99623 299 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 PALMDQ9NP74 551 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 EHFQ9NZC4 300 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 PEF1Q9UBV8 284 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 CEPT1Q9Y6K0 416 aa12.67□□□□□ -0.38
RAB11FIP3-204ENST00000449879 TPPPO94811 219 aa12.66□□□□□ -0.38
RAB11FIP3-204ENST00000449879 RRASP10301 218 aa12.66□□□□□ -0.38
RAB11FIP3-204ENST00000449879 AADACP22760 399 aa12.66□□□□□ -0.38
RAB11FIP3-204ENST00000449879 LAX1Q8IWV1 398 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms