RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 SAA1P0DJI8 122 aaPredicted RBP12□□□□□ -0.49
LIMS1-210ENST00000449684 IGKV1-13P0DP09 117 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 AADACP22760 399 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 CDK10Q15131 360 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 PRSS8Q16651 343 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 TMEM69Q5SWH9 247 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 ASPHD1Q5U4P2 390 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 ZNF429Q86V71 674 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 MFSD4AQ8N468 514 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 DLX4Q92988 240 aaPredicted RBP12□□□□□ -0.49
LIMS1-210ENST00000449684 PRR25Q96S07 402 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 SCOCQ9UIL1 159 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 SMIM31A0A1B0GVY4 71 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 PTHLHP12272 177 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 FXYD4P59646 89 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 RPL30P62888 115 aaKnown RBP11.99□□□□□ -0.49
LIMS1-210ENST00000449684 ZNF66Q6ZN08 573 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 MMD2Q8IY49 270 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 OR5AP2Q8NGF4 316 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 OR13F1Q8NGS4 319 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 VSTM2AQ8TAG5 236 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
LIMS1-210ENST00000449684 OR4C12Q96R67 309 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 SLC5A7Q9GZV3 580 aa11.99□□□□□ -0.49
LIMS1-210ENST00000449684 RANGRFQ9HD47 186 aaPredicted RBP11.99□□□□□ -0.49
LIMS1-210ENST00000449684 ZNF256Q9Y2P7 627 aaPredicted RBP11.99□□□□□ -0.49
LIMS1-210ENST00000449684 ANKRD34BA5PLL1 514 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 TNFSF12O43508 249 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 PPYP01298 95 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 KIR2DS2P43631 304 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 HERV-K104P61576 105 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 SSBP2P81877 361 aaPredicted RBP11.98□□□□□ -0.49
LIMS1-210ENST00000449684 OVCH2Q7RTZ1 564 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 ZBTB34Q8NCN2 500 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
LIMS1-210ENST00000449684 SPIN2AQ99865 258 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 SPIN2BQ9BPZ2 258 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 ELOVL1Q9BW60 279 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 FUNDC2Q9BWH2 189 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 ZNF430Q9H8G1 570 aaPredicted RBP11.98□□□□□ -0.49
LIMS1-210ENST00000449684 CCL28Q9NRJ3 127 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 COMMD3Q9UBI1 195 aa11.98□□□□□ -0.49
LIMS1-210ENST00000449684 DPPA5A6NC42 116 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 OR2A4O95047 310 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 HRASP01112 189 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 IGLV2-14P01704 120 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 OR9G9P0C7N8 305 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 ZP3P21754 424 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 TAS2R20P59543 309 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 CATR1Q13166 79 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 VKORC1L1Q8N0U8 176 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 SLC25A46Q96AG3 418 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 OR2A7Q96R45 310 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 AIFM2Q9BRQ8 373 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 TINAGL1Q9GZM7 467 aaPredicted RBP11.97□□□□□ -0.49
LIMS1-210ENST00000449684 EHFQ9NZC4 300 aa11.97□□□□□ -0.49
LIMS1-210ENST00000449684 PRSS3P35030 304 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 VBP1P61758 197 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 NCS1P62166 190 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 MSMO1Q15800 293 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 SSX9Q7RTT3 188 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 SLC25A42Q86VD7 318 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 TMEM17Q86X19 198 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 SPAG16Q8N0X2 631 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 OR6Q1Q8NGQ2 317 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 GIMAP1Q8WWP7 306 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 SNAPC3Q92966 411 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 BORCS5Q969J3 196 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 GPHA2Q96T91 129 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 B9D2Q9BPU9 175 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 RSRP1Q9BUV0 290 aa11.96□□□□□ -0.49
LIMS1-210ENST00000449684 TAS2R46P59540 309 aa11.95□□□□□ -0.5
LIMS1-210ENST00000449684 DEFA5Q01523 94 aa11.95□□□□□ -0.5
LIMS1-210ENST00000449684 TATDN3Q17R31 274 aa11.95□□□□□ -0.5
LIMS1-210ENST00000449684 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
LIMS1-210ENST00000449684 OR5H2Q8NGV7 314 aa11.95□□□□□ -0.5
LIMS1-210ENST00000449684 FYTTD1Q96QD9 318 aaKnown RBP11.95□□□□□ -0.5
LIMS1-210ENST00000449684 PEF1Q9UBV8 284 aaKnown RBP11.95□□□□□ -0.5
LIMS1-210ENST00000449684 TRIM64CA6NLI5 447 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 SULT1C2O00338 296 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 KBTBD11O94819 623 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 BRI3O95415 125 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 PMP2P02689 132 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 RPL27AP46776 148 aaKnown RBP11.94□□□□□ -0.5
LIMS1-210ENST00000449684 RFX2P48378 723 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 RORCP51449 518 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 ATP5G2Q06055 141 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 MRGPRG-AS1Q2M3A8 158 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 VAX1Q5SQQ9 334 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 C10orf55Q5SWW7 151 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 AADACL3Q5VUY0 350 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 ANKRD13BQ86YJ7 626 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 ADAD2Q8NCV1 583 aaKnown RBP11.94□□□□□ -0.5
LIMS1-210ENST00000449684 ZNF2Q9BSG1 426 aaPredicted RBP11.94□□□□□ -0.5
LIMS1-210ENST00000449684 HRASLSQ9HDD0 168 aa11.94□□□□□ -0.5
LIMS1-210ENST00000449684 FAM223BA6NKX1 122 aa11.93□□□□□ -0.5
LIMS1-210ENST00000449684 APOA1P02647 267 aa11.93□□□□□ -0.5
LIMS1-210ENST00000449684 EIF4EP06730 217 aaKnown RBP11.93□□□□□ -0.5
LIMS1-210ENST00000449684 MAS1LP35410 378 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms