RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 FAM89BQ8N5H3 189 aa8.84□□□□□ -0.99
CTC1-202ENST00000449476 VN1R17PQ8TDU5 208 aa8.84□□□□□ -0.99
CTC1-202ENST00000449476 RCC1LQ96I51 464 aaKnown RBP8.84□□□□□ -0.99
CTC1-202ENST00000449476 HILPDAQ9Y5L2 63 aa8.84□□□□□ -0.99
CTC1-202ENST00000449476 KLF7O75840 302 aaPredicted RBP8.84□□□□□ -0.99
CTC1-202ENST00000449476 PKIAP61925 76 aa8.84□□□□□ -0.99
CTC1-202ENST00000449476 ZNF788Q6ZQV5 615 aa8.84□□□□□ -0.99
CTC1-202ENST00000449476 WBP1Q96G27 269 aa8.84□□□□□ -0.99
CTC1-202ENST00000449476 PARLQ9H300 379 aa8.84□□□□□ -0.99
CTC1-202ENST00000449476 LPAR2Q9HBW0 351 aa8.84□□□□□ -0.99
CTC1-202ENST00000449476 CARHSP1Q9Y2V2 147 aaKnown RBP8.84□□□□□ -0.99
CTC1-202ENST00000449476 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -1
CTC1-202ENST00000449476 DLL1O00548 723 aa8.84□□□□□ -1
CTC1-202ENST00000449476 GLRXP35754 106 aa8.84□□□□□ -1
CTC1-202ENST00000449476 ABLIM2Q6H8Q1 611 aa8.84□□□□□ -1
CTC1-202ENST00000449476 ZNF343Q6P1L6 599 aa8.84□□□□□ -1
CTC1-202ENST00000449476 GPR61Q9BZJ8 451 aa8.84□□□□□ -1
CTC1-202ENST00000449476 GSX1Q9H4S2 264 aaPredicted RBP8.84□□□□□ -1
CTC1-202ENST00000449476 BET1LQ9NYM9 111 aa8.84□□□□□ -1
CTC1-202ENST00000449476 UFC1Q9Y3C8 167 aa8.84□□□□□ -1
CTC1-202ENST00000449476 IFNL4K9M1U5 179 aa8.83□□□□□ -1
CTC1-202ENST00000449476 ARL14EPLP0DKL9 152 aa8.83□□□□□ -1
CTC1-202ENST00000449476 IBA57Q5T440 356 aaKnown RBP8.83□□□□□ -1
CTC1-202ENST00000449476 MRPS18CQ9Y3D5 142 aaKnown RBP8.83□□□□□ -1
CTC1-202ENST00000449476 KCNMB2Q9Y691 235 aa8.83□□□□□ -1
CTC1-202ENST00000449476 ZNF729A6NN14 1252 aaPredicted RBP8.83□□□□□ -1
CTC1-202ENST00000449476 H0YIZ8 118 aa8.83□□□□□ -1
CTC1-202ENST00000449476 PRSS1P07477 247 aa8.83□□□□□ -1
CTC1-202ENST00000449476 ECSCRQ19T08 205 aa8.83□□□□□ -1
CTC1-202ENST00000449476 ACP7Q6ZNF0 438 aa8.83□□□□□ -1
CTC1-202ENST00000449476 SFXN3Q9BWM7 321 aa8.83□□□□□ -1
CTC1-202ENST00000449476 ZNF430Q9H8G1 570 aaPredicted RBP8.83□□□□□ -1
CTC1-202ENST00000449476 IGKV3-7A0A075B6H7 116 aa8.83□□□□□ -1
CTC1-202ENST00000449476 PQLC2LA1A4F0 135 aa8.83□□□□□ -1
CTC1-202ENST00000449476 A8MWL6 223 aa8.83□□□□□ -1
CTC1-202ENST00000449476 TCAPO15273 167 aa8.83□□□□□ -1
CTC1-202ENST00000449476 NDUFA2O43678 99 aa8.83□□□□□ -1
CTC1-202ENST00000449476 ACAA1P09110 424 aaPredicted RBP8.83□□□□□ -1
CTC1-202ENST00000449476 TNFSF10P50591 281 aa8.83□□□□□ -1
CTC1-202ENST00000449476 OR4C5Q8NGB2 326 aa8.83□□□□□ -1
CTC1-202ENST00000449476 TBX15Q96SF7 602 aa8.83□□□□□ -1
CTC1-202ENST00000449476 TNFRSF19Q9NS68 423 aa8.83□□□□□ -1
CTC1-202ENST00000449476 DEPPQ9NTK1 212 aa8.83□□□□□ -1
CTC1-202ENST00000449476 METTL1Q9UBP6 276 aaKnown RBP8.83□□□□□ -1
CTC1-202ENST00000449476 PGPA6NDG6 321 aa8.82□□□□□ -1
CTC1-202ENST00000449476 ZNF716A6NP11 495 aa8.82□□□□□ -1
CTC1-202ENST00000449476 CORTO00230 105 aa8.82□□□□□ -1
CTC1-202ENST00000449476 MT-ND6P03923 174 aa8.82□□□□□ -1
CTC1-202ENST00000449476 AGAP20933 346 aa8.82□□□□□ -1
CTC1-202ENST00000449476 UCNP55089 124 aa8.82□□□□□ -1
CTC1-202ENST00000449476 ZNF506Q5JVG8 444 aa8.82□□□□□ -1
CTC1-202ENST00000449476 PRNTQ86SH4 94 aa8.82□□□□□ -1
CTC1-202ENST00000449476 QTRT1Q9BXR0 403 aaKnown RBP8.82□□□□□ -1
CTC1-202ENST00000449476 PLXNA3P51805 1871 aa8.82□□□□□ -1
CTC1-202ENST00000449476 PHF3Q92576 2039 aaKnown RBP8.82□□□□□ -1
CTC1-202ENST00000449476 C8orf88P0DMB2 117 aa8.82□□□□□ -1
CTC1-202ENST00000449476 EGR1P18146 543 aa8.82□□□□□ -1
CTC1-202ENST00000449476 LHX2P50458 406 aa8.82□□□□□ -1
CTC1-202ENST00000449476 ZFP36L1Q07352 338 aaKnown RBP8.82□□□□□ -1
CTC1-202ENST00000449476 RPL39P5Q59GN2 51 aa8.82□□□□□ -1
CTC1-202ENST00000449476 TIMM23BQ5SRD1 257 aa8.82□□□□□ -1
CTC1-202ENST00000449476 SCNM1Q9BWG6 230 aa8.82□□□□□ -1
CTC1-202ENST00000449476 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
CTC1-202ENST00000449476 PKDREJQ9NTG1 2253 aa8.82□□□□□ -1
CTC1-202ENST00000449476 WNK2Q9Y3S1 2297 aa8.82□□□□□ -1
CTC1-202ENST00000449476 MPDZO75970 2070 aa8.82□□□□□ -1
CTC1-202ENST00000449476 A0A0A6YYD4 124 aa8.82□□□□□ -1
CTC1-202ENST00000449476 TMEM250H0YL14 139 aa8.82□□□□□ -1
CTC1-202ENST00000449476 CLDN18P56856 261 aa8.82□□□□□ -1
CTC1-202ENST00000449476 BIVMQ86UB2 503 aa8.82□□□□□ -1
CTC1-202ENST00000449476 LINC00518Q8N0U6 118 aa8.82□□□□□ -1
CTC1-202ENST00000449476 SNRNP40Q96DI7 357 aaKnown RBP8.82□□□□□ -1
CTC1-202ENST00000449476 MEGF10Q96KG7 1140 aa8.82□□□□□ -1
CTC1-202ENST00000449476 GBF1Q92538 1859 aa8.82□□□□□ -1
CTC1-202ENST00000449476 MGAMO43451 1857 aa8.82□□□□□ -1
CTC1-202ENST00000449476 OR2T8A6NH00 312 aa8.82□□□□□ -1
CTC1-202ENST00000449476 DNASE2O00115 360 aaPredicted RBP8.82□□□□□ -1
CTC1-202ENST00000449476 OR4C13Q8NGP0 309 aa8.82□□□□□ -1
CTC1-202ENST00000449476 DOPEY2Q9Y3R5 2298 aa8.82□□□□□ -1
CTC1-202ENST00000449476 IGKV1D-8A0A087WSZ0 117 aa8.81□□□□□ -1
CTC1-202ENST00000449476 LOC105371267A0A1B0GV96 52 aa8.81□□□□□ -1
CTC1-202ENST00000449476 C17orf98A8MV24 154 aa8.81□□□□□ -1
CTC1-202ENST00000449476 C9orf172C9J069 976 aa8.81□□□□□ -1
CTC1-202ENST00000449476 RPL30P62888 115 aaKnown RBP8.81□□□□□ -1
CTC1-202ENST00000449476 GBGT1Q8N5D6 347 aa8.81□□□□□ -1
CTC1-202ENST00000449476 EIF4E3Q8N5X7 224 aaKnown RBP8.81□□□□□ -1
CTC1-202ENST00000449476 OR1P1Q8NH06 330 aa8.81□□□□□ -1
CTC1-202ENST00000449476 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
CTC1-202ENST00000449476 PTPRDP23468 1912 aa8.81□□□□□ -1
CTC1-202ENST00000449476 IGKV1D-13A0A0B4J2D9 117 aa8.81□□□□□ -1
CTC1-202ENST00000449476 J3QR89 54 aa8.81□□□□□ -1
CTC1-202ENST00000449476 CELA3BP08861 270 aa8.81□□□□□ -1
CTC1-202ENST00000449476 IGKV1-13P0DP09 117 aa8.81□□□□□ -1
CTC1-202ENST00000449476 CRYBB3P26998 211 aa8.81□□□□□ -1
CTC1-202ENST00000449476 OR13A1Q8NGR1 328 aa8.81□□□□□ -1
CTC1-202ENST00000449476 OR9G1Q8NH87 305 aa8.81□□□□□ -1
CTC1-202ENST00000449476 SPSB4Q96A44 273 aa8.81□□□□□ -1
CTC1-202ENST00000449476 NABP2Q9BQ15 211 aa8.81□□□□□ -1
CTC1-202ENST00000449476 HSPB9Q9BQS6 159 aa8.81□□□□□ -1
CTC1-202ENST00000449476 FNDC1Q4ZHG4 1894 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms