RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 BCAP31P51572 246 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 TMEM177Q53S58 311 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 GGNBP1Q5YKI7 109 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 OSR1Q8TAX0 266 aaPredicted RBP11.75□□□□□ -0.53
TNF-208ENST00000449264 RRNAD1Q96FB5 475 aaKnown RBP11.75□□□□□ -0.53
TNF-208ENST00000449264 RITA1Q96K30 269 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 GSX1Q9H4S2 264 aaPredicted RBP11.75□□□□□ -0.53
TNF-208ENST00000449264 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 C13orf42A0A1B0GVH6 325 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 MPTX1A8MV57 137 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 ATG12O94817 140 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 MOSP00540 346 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 HRASP01112 189 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 IFNA21P01568 189 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 CXCL3P19876 107 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 CNTFRP26992 372 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 LRRC75BQ2VPJ9 315 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 C9orf139Q6ZV77 190 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 OR11H7Q8NGC8 314 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 OR2T10Q8NGZ9 312 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 SEC22AQ96IW7 307 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 RHOVQ96L33 236 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 SSX3Q99909 188 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 MEGF9Q9H1U4 602 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 RAB18Q9NP72 206 aa11.74□□□□□ -0.53
TNF-208ENST00000449264 DUXBA0A1W2PPF3 345 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 C5orf51A6NDU8 294 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 SRRM4A7MD48 611 aaKnown RBP11.73□□□□□ -0.53
TNF-208ENST00000449264 H3BUX3 64 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 FAM106CPP0CH98 169 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 SULT1A3P0DMM9 295 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 SULT1A4P0DMN0 295 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 TMEM11P17152 192 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 VDAC1P21796 283 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 H2BFWTQ7Z2G1 175 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 OR5M8Q8NGP6 311 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 EAF1Q96JC9 268 aaPredicted RBP11.73□□□□□ -0.53
TNF-208ENST00000449264 TMEM140Q9NV12 185 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 TMED3Q9Y3Q3 217 aa11.73□□□□□ -0.53
TNF-208ENST00000449264 PIGBOS1A0A0B4J2F0 54 aa11.72□□□□□ -0.53
TNF-208ENST00000449264 SAA1P0DJI8 122 aaPredicted RBP11.72□□□□□ -0.53
TNF-208ENST00000449264 MMDQ15546 238 aa11.72□□□□□ -0.53
TNF-208ENST00000449264 NMSQ5H8A3 153 aa11.72□□□□□ -0.53
TNF-208ENST00000449264 PDCD10Q9BUL8 212 aa11.72□□□□□ -0.53
TNF-208ENST00000449264 CHIAQ9BZP6 476 aa11.72□□□□□ -0.53
TNF-208ENST00000449264 TMEM160Q9NX00 188 aa11.72□□□□□ -0.53
TNF-208ENST00000449264 TNCP24821 2201 aa11.72□□□□□ -0.53
TNF-208ENST00000449264 HMX3A6NHT5 357 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 FAM90A9PA6NNJ1 464 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 SLC25A17O43808 307 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 LY6EQ16553 131 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 OR4A47Q6IF82 309 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 GSG1LQ6UXU4 331 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 GPR146Q96CH1 333 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 OR10C1Q96KK4 312 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 ZNF48Q96MX3 618 aaPredicted RBP11.71□□□□□ -0.53
TNF-208ENST00000449264 TSNAXQ99598 290 aaKnown RBP11.71□□□□□ -0.53
TNF-208ENST00000449264 CACNG5Q9UF02 275 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.53
TNF-208ENST00000449264 RBMXL2O75526 392 aaKnown RBP11.71□□□□□ -0.54
TNF-208ENST00000449264 IGLV2-23P01705 113 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 DYNLT3P51808 116 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 F2RL1P55085 397 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 H2BFSP57053 126 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 OR2B8PP59922 312 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 CD83Q01151 205 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 PLGLAQ15195 96 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 IAH1Q2TAA2 248 aaPredicted RBP11.71□□□□□ -0.54
TNF-208ENST00000449264 VMA21Q3ZAQ7 101 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 THOC7Q6I9Y2 204 aaKnown RBP11.71□□□□□ -0.54
TNF-208ENST00000449264 TMEM219Q86XT9 240 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 FAM219AQ8IW50 185 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 LSM10Q969L4 123 aaKnown RBP11.71□□□□□ -0.54
TNF-208ENST00000449264 TPSG1Q9NRR2 321 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 GSKIPQ9P0R6 139 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 NSG2Q9Y328 171 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 PLXNB1O43157 2135 aa11.71□□□□□ -0.54
TNF-208ENST00000449264 TRAV3A0A0B4J244 114 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 NCBP2LA6PVI3 153 aaKnown RBP11.7□□□□□ -0.54
TNF-208ENST00000449264 INAFM1C9JVW0 142 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 NBR2O15453 112 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 NXPH3O95157 252 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 IGHV4-59P01825 116 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 OR9G9P0C7N8 305 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 LGALS7P47929 136 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 EBI3Q14213 229 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 POU2AF1Q16633 256 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 THNSL2Q86YJ6 484 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 PIFOQ8TCI5 191 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 CHAC2Q8WUX2 184 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 SPIN2AQ99865 258 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 SPIN2BQ9BPZ2 258 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 AIFM2Q9BRQ8 373 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 ZNF436Q9C0F3 470 aaPredicted RBP11.7□□□□□ -0.54
TNF-208ENST00000449264 FBXL15Q9H469 300 aa11.7□□□□□ -0.54
TNF-208ENST00000449264 RANBP3Q9H6Z4 567 aaPredicted RBP11.7□□□□□ -0.54
TNF-208ENST00000449264 KIAA1456Q9P272 454 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms