RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 A0A0G2JRQ6 117 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 A0A1B0GU03 582 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 CCNKO75909 580 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 KRASP01116 189 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 IL6RP08887 468 aaPredicted RBP15.48■□□□□ 0.07
RPS28-202ENST00000449223 G6PCP35575 357 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 CYCSP99999 105 aaKnown RBP15.48■□□□□ 0.07
RPS28-202ENST00000449223 IL15RAQ13261 267 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 THNSL2Q86YJ6 484 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 RHOVQ96L33 236 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 MS4A7Q9GZW8 240 aaPredicted RBP15.48■□□□□ 0.07
RPS28-202ENST00000449223 IGHV3OR16-10A0A075B7F0 116 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 IGHV3-72A0A0B4J1Y9 119 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 A0A0U1RQK1 487 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 SRRM4A7MD48 611 aaKnown RBP15.48■□□□□ 0.07
RPS28-202ENST00000449223 SIX6O95475 246 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 ERVK-16P61578 105 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 AANATQ16613 207 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 TCTE3Q8IZS6 198 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 C2orf50Q96LR7 162 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 HARBI1Q96MB7 349 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 TMEM160Q9NX00 188 aa15.48■□□□□ 0.07
RPS28-202ENST00000449223 C5orf51A6NDU8 294 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 SHOXO15266 292 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 PITX3O75364 302 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 IGLV2-23P01705 113 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 FGF2P09038 288 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 FBP1P09467 338 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 FOSL1P15407 271 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 BRS3P32247 399 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 RAP2BP61225 183 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 CD83Q01151 205 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 IAH1Q2TAA2 248 aaPredicted RBP15.47■□□□□ 0.07
RPS28-202ENST00000449223 AARDQ4LEZ3 155 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 PUSL1Q8N0Z8 303 aaKnown RBP15.47■□□□□ 0.07
RPS28-202ENST00000449223 GPR146Q96CH1 333 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 TMUB1Q9BVT8 246 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 RANGRFQ9HD47 186 aaPredicted RBP15.47■□□□□ 0.07
RPS28-202ENST00000449223 NAV3Q8IVL0 2385 aa15.47■□□□□ 0.07
RPS28-202ENST00000449223 MXRA5Q9NR99 2828 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 PFDN1O60925 122 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 SPDEFO95238 335 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 MOSP00540 346 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 TUSC1Q2TAM9 212 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 Q6ZRM9 215 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 H2BFWTQ7Z2G1 175 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 Q8N6K4 173 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 ZBTB8BQ8NAP8 495 aaPredicted RBP15.46■□□□□ 0.07
RPS28-202ENST00000449223 VSTM2AQ8TAG5 236 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 RANBP3Q9H6Z4 567 aaPredicted RBP15.46■□□□□ 0.07
RPS28-202ENST00000449223 TMEM140Q9NV12 185 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 BET1LQ9NYM9 111 aa15.46■□□□□ 0.07
RPS28-202ENST00000449223 C13orf42A0A1B0GVH6 325 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 FAM25EA8MYX2 175 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 PAX6P26367 422 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 UBE2KP61086 200 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 RPS16P62249 146 aaKnown RBP15.45■□□□□ 0.06
RPS28-202ENST00000449223 SMCO1Q147U7 214 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 OR4A47Q6IF82 309 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 DMBX1Q8NFW5 382 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 OR4D5Q8NGN0 318 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 OR2T10Q8NGZ9 312 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 FYTTD1Q96QD9 318 aaKnown RBP15.45■□□□□ 0.06
RPS28-202ENST00000449223 TSNAXQ99598 290 aaKnown RBP15.45■□□□□ 0.06
RPS28-202ENST00000449223 PDCD10Q9BUL8 212 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 FAM96BQ9Y3D0 163 aa15.45■□□□□ 0.06
RPS28-202ENST00000449223 IGKV1D-33P01593 117 aa15.44■□□□□ 0.06
RPS28-202ENST00000449223 IGKV1-33P01594 117 aa15.44■□□□□ 0.06
RPS28-202ENST00000449223 SNRNP70P08621 437 aaKnown RBP15.44■□□□□ 0.06
RPS28-202ENST00000449223 SAA1P0DJI8 122 aaPredicted RBP15.44■□□□□ 0.06
RPS28-202ENST00000449223 FOXRED2Q8IWF2 684 aa15.44■□□□□ 0.06
RPS28-202ENST00000449223 VKORC1L1Q8N0U8 176 aa15.44■□□□□ 0.06
RPS28-202ENST00000449223 OR4A5Q8NH83 315 aa15.44■□□□□ 0.06
RPS28-202ENST00000449223 RNASE11Q8TAA1 199 aaKnown RBP15.44■□□□□ 0.06
RPS28-202ENST00000449223 EAF1Q96JC9 268 aaPredicted RBP15.44■□□□□ 0.06
RPS28-202ENST00000449223 PRDM13Q9H4Q3 707 aa15.44■□□□□ 0.06
RPS28-202ENST00000449223 CACNG5Q9UF02 275 aa15.44■□□□□ 0.06
RPS28-202ENST00000449223 NDUFA3O95167 84 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 FAM106CPP0CH98 169 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 FAM120AOSQ5T036 256 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 THOC7Q6I9Y2 204 aaKnown RBP15.43■□□□□ 0.06
RPS28-202ENST00000449223 NPBQ8NG41 125 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 RBMXL1Q96E39 390 aaKnown RBP15.43■□□□□ 0.06
RPS28-202ENST00000449223 WDR89Q96FK6 387 aaPredicted RBP15.43■□□□□ 0.06
RPS28-202ENST00000449223 RITA1Q96K30 269 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 G3V3Q6 166 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 KBTBD11O94819 623 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 CRYGBP07316 175 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 OR9G9P0C7N8 305 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 RELBQ01201 579 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 CD300CQ08708 224 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 VMA21Q3ZAQ7 101 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 SSX9Q7RTT3 188 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 ZNF429Q86V71 674 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 TEX45Q8NA69 505 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 OR8H1Q8NGG4 311 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 PIFOQ8TCI5 191 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 PPP1R14BQ96C90 147 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 CHIAQ9BZP6 476 aa15.43■□□□□ 0.06
RPS28-202ENST00000449223 CACFD1Q9UGQ2 172 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms