RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	CACNA1H	O95180	2353 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	SEC14L6	B5MCN3	397 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	CD1B	P29016	333 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	KLF3	P57682	345 aa	Predicted RBP	14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	RPL23	P62829	140 aa	Known RBP	14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	TLE1	Q04724	770 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	ACOT6	Q3I5F7	207 aa	Predicted RBP	14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	IGFL3	Q6UXB1	125 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	RPUSD4	Q96CM3	377 aa	Known RBP	14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	PARL	Q9H300	379 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	FAM215A	Q9Y5M1	114 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	VDAC2	P45880	294 aa	Predicted RBP	14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	BSX	Q3C1V8	233 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	OR4A16	Q8NH70	328 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	DDB2	Q92466	427 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	FRZB	Q92765	325 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	CALY	Q9NYX4	217 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	GAB2	Q9UQC2	676 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	DSCAML1	Q8TD84	2053 aa		14.01	□□□□□ -0.17
TOM1-210	ENST00000449058	TET2	Q6N021	2002 aa	Predicted RBP	14	□□□□□ -0.17
TOM1-210	ENST00000449058	IGLV3-9	A0A075B6K5	115 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	ITGB1BP1	O14713	200 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	CRYAA	P02489	173 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	CDC34	P49427	236 aa	Predicted RBP	14	□□□□□ -0.17
TOM1-210	ENST00000449058	RELB	Q01201	579 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	TMEM249	Q2WGJ8	235 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	ZNF600	Q6ZNG1	722 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	SSX9	Q7RTT3	188 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	OR4F5	Q8NH21	305 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	OR4F4	Q96R69	305 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	PYGO2	Q9BRQ0	406 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	GGACT	Q9BVM4	153 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	MIOX	Q9UGB7	285 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	LINC00587	B1AMM8	73 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	PRSS46	E5RG02	174 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	PAGE4	O60829	102 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	PFN1	P07737	140 aa	Known RBP	14	□□□□□ -0.17
TOM1-210	ENST00000449058	TRGC1	P0CF51	173 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	S100P	P25815	95 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	KIR2DS2	P43631	304 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	EDDM3B	P56851	147 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	RPP30	P78346	268 aa	Known RBP	14	□□□□□ -0.17
TOM1-210	ENST00000449058	C16orf82	Q7Z2V1	217 aa		14	□□□□□ -0.17
TOM1-210	ENST00000449058	GAR1	Q9NY12	217 aa	Known RBP	14	□□□□□ -0.17
TOM1-210	ENST00000449058	DSCAM	O60469	2012 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	SMCO3	A2RU48	225 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	SOX15	O60248	233 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	MPDU1	O75352	247 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	DEFA4	P12838	97 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	TMPRSS3	P57727	454 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	ERVK-16	P61578	105 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	ALKBH2	Q6NS38	261 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	VKORC1L1	Q8N0U8	176 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	FAM222B	Q8WU58	562 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	ITLN1	Q8WWA0	313 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	RAB1C	Q92928	201 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	NEIL1	Q96FI4	390 aa	Predicted RBP	13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	S1PR3	Q99500	378 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	FAM234A	Q9H0X4	552 aa		13.99	□□□□□ -0.17
TOM1-210	ENST00000449058	SLC31A2	O15432	143 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	SPRY3	O43610	288 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	GATA4	P43694	442 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	C17orf58	Q2M2W7	97 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	RPRML	Q8N4K4	120 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	DCAF16	Q9NXF7	216 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	TANC2	Q9HCD6	1990 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	SPEN	Q96T58	3664 aa	Known RBP	13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	RRH	O14718	337 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	GFRA3	O60609	400 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	IFNA10	P01566	189 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	IGHV3-7	P01780	117 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	UTF1	Q5T230	341 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	HIST3H2BB	Q8N257	126 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	TMEM140	Q9NV12	185 aa		13.98	□□□□□ -0.17
TOM1-210	ENST00000449058	TRAV3	A0A0B4J244	114 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	SOD3	P08294	240 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	S100A2	P29034	98 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	RAB7A	P51149	207 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	OR10A7	Q8NGE5	316 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	TMEM170A	Q8WVE7	144 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	HEYL	Q9NQ87	328 aa	Predicted RBP	13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	ZFHX4	Q86UP3	3567 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	SVIL	O95425	2214 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	PPP1R2P9	O14990	202 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	SELL	P14151	372 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	NPPC	P23582	126 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	OPRK1	P41145	380 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	CT45A1	Q5HYN5	189 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	GCSAML	Q5JQS6	135 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	C1orf185	Q5T7R7	199 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	TREML4	Q6UXN2	200 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058		Q6ZS92	163 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	OR51G1	Q8NGK1	321 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	OR4S2	Q8NH73	311 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	CT45A3	Q8NHU0	189 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	SRD5A3	Q9H8P0	318 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	GFOD1	Q9NXC2	390 aa		13.97	□□□□□ -0.17
TOM1-210	ENST00000449058	TRGV8	A0A0C4DH27	118 aa		13.96	□□□□□ -0.17

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