RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 OR1B1Q8NGR6 318 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR1L8Q8NGR8 309 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 SLC25A46Q96AG3 418 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 SLC25A31Q9H0C2 315 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMEM133Q9H2Q1 129 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 PAM16Q9Y3D7 125 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 GEMIN2O14893 280 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 SIGLEC5O15389 551 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 NPIPB7O75200 414 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 MGST1P10620 155 aaKnown RBP4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 PSG2P11465 335 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 GP9P14770 177 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 ZNF250P15622 560 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 CD34P28906 385 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 TAS2R60P59551 318 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 CST9LP1Q5W188 147 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 CLEC19AQ6UXS0 136 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 DRAM1Q8N682 238 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 PXT1Q8NFP0 134 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR52N4Q8NGI2 321 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR8D4Q8NGM9 314 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 AQP3Q92482 292 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 RCHY1Q96PM5 261 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 CHIAQ9BZP6 476 aa4.7□□□□□ -1.66
CDC42BPA-209ENST00000448940 PPP5D1E7EU14 171 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 FCN1O00602 326 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 TTRP02766 147 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 SCTP09683 121 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 CDC34P49427 236 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 CCL18P55774 89 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 CNIH2Q6PI25 160 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 ETV3LQ6ZN32 361 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 DMRTB1Q96MA1 342 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 CCDC32Q9BV29 185 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 GABARAPL1Q9H0R8 117 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 MAB21L2Q9Y586 359 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRDV1A0A1B0GX56 115 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 NAP1L6A6NFF2 107 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR2J3O76001 311 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 HOXB5P09067 269 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 HIST1H1EP10412 219 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 NQO2P16083 231 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 MFAP4P55083 255 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 RBM11P57052 281 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 DEDD2Q8WXF8 326 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 ADGRL4Q9HBW9 690 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 HBZP02008 142 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 SCGB1D4Q6XE38 83 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 C6orf201Q7Z4U5 140 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 LRRC28Q86X40 367 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 NUDCD2Q8WVJ2 157 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 LEAP2Q969E1 77 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 SRRQ9GZT4 340 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 LINC01619G3V211 115 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 FSHBP01225 129 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 CLPSP04118 112 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 CCL3L1P16619 93 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 PTBP1P26599 531 aaKnown RBP eCLIP4.69□□□□□ -1.662e-6■■■□□ 14.6
CDC42BPA-209ENST00000448940 ETV6P41212 452 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR11H1Q8NG94 326 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 PSMG3-AS1Q96PY0 264 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 MMP28Q9H239 520 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 PRNDQ9UKY0 176 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRDCB7Z8K6 153 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 H0YL77 283 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR7C2O60412 319 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 PMP2P02689 132 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 COMPP49747 757 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 MAB21L1Q13394 359 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 SAXO1Q8IYX7 474 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 DLX4Q92988 240 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 PROK2Q9HC23 129 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 FGF20Q9NP95 211 aaPredicted RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 RCC2Q9P258 522 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 TBL2Q9Y4P3 447 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 SELENOKQ9Y6D0 94 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 PTPRBP23467 1997 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 DNAJC9-AS1A6NH13 148 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV4-59P01825 116 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 GLIPR1P48060 266 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 NDUFA6P56556 154 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 HLA-DRB3P79483 266 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 C12orf73Q69YU5 71 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 NAA40Q86UY6 237 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMEM256Q8N2U0 113 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 C10orf111Q8N326 155 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMEM56-RWDD3S4R434 201 aa4.69□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRAPPC2P0DI81 140 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRAPPC2BP0DI82 140 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 HIST1H1BP16401 226 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 ETV1P50549 477 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 TCL1AP56279 114 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 SMAGPQ0VAQ4 97 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 UNC119Q13432 240 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 RNF212Q495C1 297 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 DRAXINQ8NBI3 349 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 NPAS1Q99742 590 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 CLEC2DQ9UHP7 191 aa4.68□□□□□ -1.66
CDC42BPA-209ENST00000448940 JPT1Q9UK76 154 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 657.8 ms