RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 AIFM2Q9BRQ8 373 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 MXRA5Q9NR99 2828 aa15.69■□□□□ 0.1
SGCE-207ENST00000447873 NAV3Q8IVL0 2385 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 MOSP00540 346 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 IGKV1-5P01602 117 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 FAM106CPP0CH98 169 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 CLEC9AQ6UXN8 241 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 SSX9Q7RTT3 188 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 VKORC1L1Q8N0U8 176 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 OR11H7Q8NGC8 314 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 OR2T10Q8NGZ9 312 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 LSM10Q969L4 123 aaKnown RBP15.68■□□□□ 0.1
SGCE-207ENST00000447873 RHOVQ96L33 236 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 TMEM160Q9NX00 188 aa15.68■□□□□ 0.1
SGCE-207ENST00000447873 C13orf42A0A1B0GVH6 325 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 C5orf51A6NDU8 294 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 FAM90A9PA6NNJ1 464 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 HLA-GP17693 338 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 CXCL3P19876 107 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 LGALS7P47929 136 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 HNF4GQ14541 408 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 DEFB112Q30KQ8 113 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 GSG1LQ6UXU4 331 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 OR5M8Q8NGP6 311 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 EAF1Q96JC9 268 aaPredicted RBP15.67■□□□□ 0.1
SGCE-207ENST00000447873 RITA1Q96K30 269 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 SSX3Q99909 188 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 RNF5Q99942 180 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 MMP24Q9Y5R2 645 aa15.67■□□□□ 0.1
SGCE-207ENST00000447873 SRRM4A7MD48 611 aaKnown RBP15.66■□□□□ 0.1
SGCE-207ENST00000447873 SIX6O95475 246 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 TRAPPC2P0DI81 140 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 TRAPPC2BP0DI82 140 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 DYNLT3P51808 116 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 LRRC75BQ2VPJ9 315 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 NMSQ5H8A3 153 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 H2BFWTQ7Z2G1 175 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 THNSL2Q86YJ6 484 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 MDFIC2A0A1B0GVS7 189 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 MPTX1A8MV57 137 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 EBI3Q14213 229 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 POU2AF1Q16633 256 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 FAM219AQ8IW50 185 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 GPR146Q96CH1 333 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 TSNAXQ99598 290 aaKnown RBP15.66■□□□□ 0.1
SGCE-207ENST00000447873 TMEM140Q9NV12 185 aa15.66■□□□□ 0.1
SGCE-207ENST00000447873 TMEM11P17152 192 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 AANATQ16613 207 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 OR4A47Q6IF82 309 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 CHAC2Q8WUX2 184 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 ZDHHC16Q969W1 377 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 OR10C1Q96KK4 312 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 SPIN2AQ99865 258 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 SPIN2BQ9BPZ2 258 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 PDCD10Q9BUL8 212 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 HIVEP2P31629 2446 aa15.65■□□□□ 0.1
SGCE-207ENST00000447873 A0A0G2JRQ6 117 aa15.64■□□□□ 0.09
SGCE-207ENST00000447873 IGLV2-23P01705 113 aa15.64■□□□□ 0.09
SGCE-207ENST00000447873 SAA1P0DJI8 122 aaPredicted RBP15.64■□□□□ 0.09
SGCE-207ENST00000447873 H2BFSP57053 126 aa15.64■□□□□ 0.09
SGCE-207ENST00000447873 MMDQ15546 238 aa15.64■□□□□ 0.09
SGCE-207ENST00000447873 IZUMO4Q1ZYL8 232 aa15.64■□□□□ 0.09
SGCE-207ENST00000447873 IAH1Q2TAA2 248 aaPredicted RBP15.64■□□□□ 0.09
SGCE-207ENST00000447873 VMA21Q3ZAQ7 101 aa15.64■□□□□ 0.09
SGCE-207ENST00000447873 THOC7Q6I9Y2 204 aaKnown RBP15.64■□□□□ 0.09
SGCE-207ENST00000447873 VSTM2AQ8TAG5 236 aa15.64■□□□□ 0.09
SGCE-207ENST00000447873 CHIAQ9BZP6 476 aa15.64■□□□□ 0.09
SGCE-207ENST00000447873 ZNF436Q9C0F3 470 aaPredicted RBP15.64■□□□□ 0.09
SGCE-207ENST00000447873 H3BUX3 64 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 SLC25A17O43808 307 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 OR2A4O95047 310 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 P0C879 139 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 CNTFRP26992 372 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 CD83Q01151 205 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 FBLN7Q53RD9 439 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 PIFOQ8TCI5 191 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 OR2A7Q96R45 310 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 RANBP3Q9H6Z4 567 aaPredicted RBP15.63■□□□□ 0.09
SGCE-207ENST00000447873 GSKIPQ9P0R6 139 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 CACNG5Q9UF02 275 aa15.63■□□□□ 0.09
SGCE-207ENST00000447873 A0A1B0GU03 582 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 UBE2KP61086 200 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 PSG5Q15238 335 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 Q6ZRM9 215 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 Q71RC1 249 aaPredicted RBP15.62■□□□□ 0.09
SGCE-207ENST00000447873 Q8N6K4 173 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 C2orf50Q96LR7 162 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 GSX1Q9H4S2 264 aaPredicted RBP15.62■□□□□ 0.09
SGCE-207ENST00000447873 BET1LQ9NYM9 111 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 KIAA1456Q9P272 454 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 ZFHX3Q15911 3703 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 NBR2O15453 112 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 RBMXL2O75526 392 aaKnown RBP15.62■□□□□ 0.09
SGCE-207ENST00000447873 CCNKO75909 580 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 SPDEFO95238 335 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 OR9G9P0C7N8 305 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 SLC25A6P12236 298 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 F2RL1P55085 397 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 SCGB2A2Q13296 93 aa15.62■□□□□ 0.09
SGCE-207ENST00000447873 SMCO1Q147U7 214 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms