RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 Q6ZS49 121 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 ADM2Q7Z4H4 148 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 LYG1Q8N1E2 194 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 TMEM35BQ8NCS4 154 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 UBALD1Q8TB05 177 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 LMX1AQ8TE12 382 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 ZNF721Q8TF20 911 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 OR5P3Q8WZ94 311 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 HIST1H2BAQ96A08 127 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 FOPNLQ96NB1 174 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 ERMAPQ96PL5 475 aaPredicted RBP2.45□□□□□ -2.02
PMS1-216ENST00000447734 SH3BGRL3Q9H299 93 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 PARVBQ9HBI1 364 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 LYRM2Q9NU23 88 aaPredicted RBP2.45□□□□□ -2.02
PMS1-216ENST00000447734 SSR3Q9UNL2 185 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 ICOSQ9Y6W8 199 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 DOCK9Q9BZ29 2069 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 CHD5Q8TDI0 1954 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 TRBV20OR9-2A0A075B6H5 130 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 IGKV3D-20A0A0C4DH25 116 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 A0A0J9YY10 115 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 A0A1B0GX78 115 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 C9JCJ5 164 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 H7C1C5 153 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 PFDN1O60925 122 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 MED6O75586 246 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 NDUFC2O95298 119 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 ZNF682O95780 498 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 HMGN1P05114 100 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 RBP1P09455 135 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 SPI1P17947 270 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 NPY1RP25929 384 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 CRABP2P29373 138 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 NCALDP61601 193 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 LCN6P62502 163 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 ZNF816Q0VGE8 651 aaPredicted RBP2.44□□□□□ -2.02
PMS1-216ENST00000447734 FUT5Q11128 374 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 OR8G1Q15617 311 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 SPINK14Q6IE38 97 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 AMTNQ6UX39 209 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 GPHB5Q86YW7 130 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 SAXO1Q8IYX7 474 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 ZFAND2AQ8N6M9 145 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 OR13C8Q8NGS7 320 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 OR13D1Q8NGV5 346 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 OR10J5Q8NHC4 309 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 GRPEL2Q8TAA5 225 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 GPR119Q8TDV5 335 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 GPR146Q96CH1 333 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 AIF1LQ9BQI0 150 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 PBDC1Q9BVG4 233 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 WDR61Q9GZS3 305 aaKnown RBP2.44□□□□□ -2.02
PMS1-216ENST00000447734 TMEM222Q9H0R3 208 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 MED29Q9NX70 200 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 FBXL12Q9NXK8 326 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 SLC23A2Q9UGH3 650 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 TICRRQ7Z2Z1 1910 aa2.44□□□□□ -2.02
PMS1-216ENST00000447734 SCN1AP35498 2009 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 TRBV24-1A0A075B6N3 115 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 A0A1B0GW54 56 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 TMEM150BA6NC51 233 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 MAP1LC3B2A6NCE7 125 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 H3BMM0 161 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 AIPO00170 330 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 UBE2L6O14933 153 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 PLA2G10O15496 165 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 SLC25A20O43772 301 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 ORC5O43913 435 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 SH2D1AO60880 128 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 DHFRP00374 187 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 IGLV7-43P04211 117 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 PPIBP23284 216 aaKnown RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 CRABP1P29762 137 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 GLRXP35754 106 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 TAF6P49848 677 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 DEFA3P59666 94 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 TBPL1P62380 186 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 SMCO1Q147U7 214 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 MRPL51Q4U2R6 128 aaKnown RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 C10orf91Q5T1B1 145 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 DCUN1D2Q6PH85 259 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 WDR59Q6PJI9 974 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 H1FOOQ8IZA3 346 aaPredicted RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 FAM24BQ8N5W8 94 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 PACRGLQ8N7B6 248 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 ZNF283Q8N7M2 679 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 DAND5Q8N907 189 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 MRPL30Q8TCC3 161 aaKnown RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 MAFIPQ8WZ33 124 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 UBE2WQ96B02 151 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 ZNF2Q9BSG1 426 aaPredicted RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 TMEM70Q9BUB7 260 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 MAP1LC3BQ9GZQ8 125 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 C6orf62Q9GZU0 229 aaPredicted RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 C11orf68Q9H3H3 251 aaKnown RBP2.43□□□□□ -2.02
PMS1-216ENST00000447734 ACER3Q9NUN7 267 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 SNX12Q9UMY4 172 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 GINS2Q9Y248 185 aa2.43□□□□□ -2.02
PMS1-216ENST00000447734 LINC00588Q9Y4M8 146 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms