RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 OSR1Q8TAX0 266 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 TSNAXQ99598 290 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 MARVELD1Q9BSK0 173 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 FBXL15Q9H469 300 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 MOB4Q9Y3A3 225 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 NF1P21359 2839 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 SETD2Q9BYW2 2564 aaPredicted RBP14.33□□□□□ -0.11
TRAPPC4-203ENST00000447216 SH2D7A6NKC9 451 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 NBR2O15453 112 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 SLC25A17O43808 307 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 HLA-AP01891 365 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 MECP2P51608 486 aaKnown RBP14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 DHRS2Q13268 280 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 ANKRD55Q3KP44 614 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 LYG2Q86SG7 212 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 R3HDM4Q96D70 268 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 ALX4Q9H161 411 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 PLEKHA2Q9HB19 425 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 TPSG1Q9NRR2 321 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 FAM212BQ9NTI7 297 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 COMMD9Q9P000 198 aa14.33□□□□□ -0.12
TRAPPC4-203ENST00000447216 RRHO14718 337 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 B3GALNT1O75752 331 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 SAA1P0DJI8 122 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 ANXA3P12429 323 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 G6PCP35575 357 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 LGALS7P47929 136 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 TMEM268Q5VZI3 342 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 LIN54Q6MZP7 749 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 C11orf88Q6PI97 169 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 LIAT1Q6ZQX7 453 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 LURAP1LQ8IV03 231 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 SELENOHQ8IZQ5 122 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 Q8N9W7 124 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 NPBQ8NG41 125 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 JMJD8Q96S16 334 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 RNF5Q99942 180 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 KIAA1456Q9P272 454 aa14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 METTL1Q9UBP6 276 aaKnown RBP14.32□□□□□ -0.12
TRAPPC4-203ENST00000447216 CLDN34H7C241 214 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 NDUFA3O95167 84 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 HRASP01112 189 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 KRASP01116 189 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 NQO2P16083 231 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 OXA1LQ15070 435 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 PLGLAQ15195 96 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 C16orf82Q7Z2V1 217 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 C5orf56Q8N8D9 126 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 DMBX1Q8NFW5 382 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 TAF15Q92804 592 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 RHOVQ96L33 236 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 CLCC1Q96S66 551 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 C1RLQ9NZP8 487 aa14.31□□□□□ -0.12
TRAPPC4-203ENST00000447216 A0A0A6YYJ9 748 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 FAM181BA6NEQ2 426 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 MARCH11A6NNE9 402 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 SPDEFO95238 335 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 CDS2O95674 445 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 IGKV1-5P01602 117 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 AMY1AP04745 511 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 IL5P05113 134 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 CRYGBP07316 175 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 RNASE1P07998 156 aaKnown RBP14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 RAG2P55895 527 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 UBE2KP61086 200 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 ERVK-16P61578 105 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 C5orf64Q2M2E5 130 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 VMA21Q3ZAQ7 101 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 ZNF695Q8IW36 515 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 FAM71E2Q8N5Q1 922 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 OR8H1Q8NGG4 311 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 CHPT1Q8WUD6 406 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 SEC22AQ96IW7 307 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 TMEM56Q96MV1 263 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 TMEM56-RWDD3S4R434 201 aa14.3□□□□□ -0.12
TRAPPC4-203ENST00000447216 C2CD3Q4AC94 2353 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 TRAV3A0A0B4J244 114 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 A0A0B4J293 547 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 DHFRP00374 187 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 PJVKQ0ZLH3 352 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 POU2AF1Q16633 256 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 IZUMO4Q1ZYL8 232 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 OR4A47Q6IF82 309 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 PUSL1Q8N0Z8 303 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 LGI3Q8N145 548 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 ZNF431Q8TF32 576 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 RBPMSQ93062 196 aaKnown RBP14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 RASL11BQ9BPW5 248 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 TMEM140Q9NV12 185 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 SIGLEC9Q9Y336 463 aa14.29□□□□□ -0.12
TRAPPC4-203ENST00000447216 A0A0G2JRQ6 117 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 FCN1O00602 326 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 FGF16O43320 207 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 OR2A4O95047 310 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 DUS4LO95620 317 aaKnown RBP14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 AKR1C2P52895 323 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 BLCAPP62952 87 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 SRPXP78539 464 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 MRGPRG-AS1Q2M3A8 158 aa14.28□□□□□ -0.12
TRAPPC4-203ENST00000447216 C9orf152Q5JTZ5 239 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms