RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 Q9UFV3 132 aa11.02□□□□□ -0.64
DDX56-206ENST00000446987 HCFC1P51610 2035 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 IGKV1D-8A0A087WSZ0 117 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 A0A1W2PNR3 127 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 SIRPB1O00241 398 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 CDIPTO14735 213 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 SSSCA1O60232 199 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 GP1BBP13224 206 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 BIDP55957 195 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 MRPS34P82930 218 aaKnown RBP11.02□□□□□ -0.65
DDX56-206ENST00000446987 FAM78BQ5VT40 261 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 LCN15Q6UWW0 184 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 ASCL4Q6XD76 172 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 C19orf35Q6ZS72 473 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 BATF2Q8N1L9 274 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 OR5D18Q8NGL1 313 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 DYRK2Q92630 601 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 FBXL7Q9UJT9 491 aa11.02□□□□□ -0.65
DDX56-206ENST00000446987 TMED7-TICAM2A0A0A6YYA0 188 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 CXCL13O43927 109 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 CLDN1O95832 211 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 WNT2P09544 360 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 SLC25A6P12236 298 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 OMGP23515 440 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 TIMP3P35625 211 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 ZP4Q12836 540 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 GUSBP1Q15486 140 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 PLPPR1Q8TBJ4 325 aa11.01□□□□□ -0.65
DDX56-206ENST00000446987 NPIPB13A6NJU9 1138 aa11□□□□□ -0.65
DDX56-206ENST00000446987 NPIPB4C9JG80 1138 aa11□□□□□ -0.65
DDX56-206ENST00000446987 C17orf112F2Z3M2 114 aa11□□□□□ -0.65
DDX56-206ENST00000446987 PHF1O43189 567 aaPredicted RBP11□□□□□ -0.65
DDX56-206ENST00000446987 TRAF3IP2O43734 574 aaPredicted RBP11□□□□□ -0.65
DDX56-206ENST00000446987 PRRX1P54821 245 aa11□□□□□ -0.65
DDX56-206ENST00000446987 FOXF2Q12947 444 aa11□□□□□ -0.65
DDX56-206ENST00000446987 DNAJA3Q96EY1 480 aa11□□□□□ -0.65
DDX56-206ENST00000446987 NEIL1Q96FI4 390 aaPredicted RBP11□□□□□ -0.65
DDX56-206ENST00000446987 PSMG3-AS1Q96PY0 264 aa11□□□□□ -0.65
DDX56-206ENST00000446987 RAB40CQ96S21 281 aa11□□□□□ -0.65
DDX56-206ENST00000446987 MCTS1Q9ULC4 181 aaKnown RBP11□□□□□ -0.65
DDX56-206ENST00000446987 COA3Q9Y2R0 106 aaPredicted RBP11□□□□□ -0.65
DDX56-206ENST00000446987 C3orf85A0A1B0GTC6 90 aa11□□□□□ -0.65
DDX56-206ENST00000446987 CST7O76096 145 aa11□□□□□ -0.65
DDX56-206ENST00000446987 HINT1P49773 126 aaPredicted RBP11□□□□□ -0.65
DDX56-206ENST00000446987 ZNF154Q13106 437 aa11□□□□□ -0.65
DDX56-206ENST00000446987 LRRC75BQ2VPJ9 315 aa11□□□□□ -0.65
DDX56-206ENST00000446987 COX19Q49B96 90 aa11□□□□□ -0.65
DDX56-206ENST00000446987 OR10J3Q5JRS4 329 aa11□□□□□ -0.65
DDX56-206ENST00000446987 SPIN3Q5JUX0 258 aa11□□□□□ -0.65
DDX56-206ENST00000446987 ZNF808Q8N4W9 903 aaPredicted RBP11□□□□□ -0.65
DDX56-206ENST00000446987 RND1Q92730 232 aa11□□□□□ -0.65
DDX56-206ENST00000446987 LHX4Q969G2 390 aa11□□□□□ -0.65
DDX56-206ENST00000446987 UHRF2Q96PU4 802 aa11□□□□□ -0.65
DDX56-206ENST00000446987 LIME1Q9H400 295 aa11□□□□□ -0.65
DDX56-206ENST00000446987 A0A1B0GUS0 222 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 LOC102725191A0A1B0GVB3 256 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 SLC22A20A6NK97 555 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 MPPED1O15442 326 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 VDAC1P21796 283 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 PAX9P55771 341 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 PAX2Q02962 417 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 MYBPHQ13203 477 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 NMSQ5H8A3 153 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 TMEM211Q6ICI0 200 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 BHLHA15Q7RTS1 189 aaPredicted RBP10.99□□□□□ -0.65
DDX56-206ENST00000446987 LRP11Q86VZ4 500 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 CALHM1Q8IU99 346 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 OR4P4Q8NGL7 312 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 GPER1Q99527 375 aa10.99□□□□□ -0.65
DDX56-206ENST00000446987 ASH1LQ9NR48 2969 aaKnown RBP10.99□□□□□ -0.65
DDX56-206ENST00000446987 NBPF19A0A087WUL8 3843 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 TMEM50AO95807 157 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 CD33P20138 364 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 TFF3Q07654 80 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 OR8B8Q15620 311 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 DOK3Q7L591 496 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 ZNF695Q8IW36 515 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 OR4F17Q8NGA8 305 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 OR52L2PQ8NGH6 319 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 OR4F4Q96R69 305 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 SLC39A9Q9NUM3 307 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 IGHV3-15A0A0B4J1V0 119 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 A0A1W2PP11 408 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 DPRXA6NFQ7 191 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 ZNF850A8MQ14 1090 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 G3V4G9 280 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 SLC33A1O00400 549 aaPredicted RBP10.98□□□□□ -0.65
DDX56-206ENST00000446987 PSG1P11464 419 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 CDC34P49427 236 aaPredicted RBP10.98□□□□□ -0.65
DDX56-206ENST00000446987 KRTDAPP60985 99 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 RHOBP62745 196 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 SELENOHQ8IZQ5 122 aaKnown RBP10.98□□□□□ -0.65
DDX56-206ENST00000446987 MEGF9Q9H1U4 602 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 NRN1Q9NPD7 142 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 PLEKHJ1Q9NW61 149 aa10.98□□□□□ -0.65
DDX56-206ENST00000446987 RNF24Q9Y225 148 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms