RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 COMMD1Q8N668 190 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 TMEM204Q9BSN7 226 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 TMEM140Q9NV12 185 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 ERVK-16P61578 105 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 RPS16P62249 146 aaKnown RBP14.3□□□□□ -0.12
SMC6-206ENST00000446852 RELBQ01201 579 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 LRRC75BQ2VPJ9 315 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 SPSB3Q6PJ21 355 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 OR10A7Q8NGE5 316 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 NKX6-2Q9C056 277 aaPredicted RBP14.3□□□□□ -0.12
SMC6-206ENST00000446852 CCL20P78556 96 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 GUK1Q16774 197 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 HFEQ30201 348 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 AKR1C8PQ5T2L2 129 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 SCGB1C1Q8TD33 95 aa14.3□□□□□ -0.12
SMC6-206ENST00000446852 CIB3Q96Q77 187 aaPredicted RBP14.3□□□□□ -0.12
SMC6-206ENST00000446852 WDR61Q9GZS3 305 aaKnown RBP14.3□□□□□ -0.12
SMC6-206ENST00000446852 TACC2O95359 2948 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 UBE2L5PA0A1B0GUS4 154 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 IFNA17P01571 189 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 DAOP14920 347 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 SVBPQ8N300 66 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 OR4A16Q8NH70 328 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 NUPL2O15504 423 aaKnown RBP14.29□□□□□ -0.12
SMC6-206ENST00000446852 CT45A6P0DMU7 189 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 CT45A5P0DMU8 189 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 CT45A7P0DMV0 189 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 COL8A2P25067 703 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 SP5Q6BEB4 398 aaPredicted RBP14.29□□□□□ -0.12
SMC6-206ENST00000446852 ADTRPQ96IZ2 230 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 RHOVQ96L33 236 aa14.29□□□□□ -0.12
SMC6-206ENST00000446852 SFTPCP11686 197 aa14.28□□□□□ -0.12
SMC6-206ENST00000446852 PARD6GQ9BYG4 376 aaPredicted RBP14.28□□□□□ -0.12
SMC6-206ENST00000446852 VSIRQ9H7M9 311 aa14.28□□□□□ -0.12
SMC6-206ENST00000446852 C15orf62A8K5M9 175 aa14.27□□□□□ -0.12
SMC6-206ENST00000446852 H2AFB1P0C5Y9 115 aa14.27□□□□□ -0.12
SMC6-206ENST00000446852 OR8U8P0C7N1 319 aa14.27□□□□□ -0.12
SMC6-206ENST00000446852 OR4A47Q6IF82 309 aa14.27□□□□□ -0.12
SMC6-206ENST00000446852 PSMG3Q9BT73 122 aaPredicted RBP14.27□□□□□ -0.12
SMC6-206ENST00000446852 EIF5A2Q9GZV4 153 aaKnown RBP14.27□□□□□ -0.12
SMC6-206ENST00000446852 TNCP24821 2201 aa14.27□□□□□ -0.12
SMC6-206ENST00000446852 FAM74A7A6NL05 159 aa14.27□□□□□ -0.13
SMC6-206ENST00000446852 DNASE2O00115 360 aaPredicted RBP14.27□□□□□ -0.13
SMC6-206ENST00000446852 PPT1P50897 306 aa14.27□□□□□ -0.13
SMC6-206ENST00000446852 DLX6P56179 175 aa14.27□□□□□ -0.13
SMC6-206ENST00000446852 SPCS3P61009 180 aa14.27□□□□□ -0.13
SMC6-206ENST00000446852 FAM74A3Q4VXF1 159 aa14.27□□□□□ -0.13
SMC6-206ENST00000446852 ZNF833PQ6ZTB9 187 aa14.27□□□□□ -0.13
SMC6-206ENST00000446852 LFNGQ8NES3 379 aa14.27□□□□□ -0.13
SMC6-206ENST00000446852 TAF15Q92804 592 aaKnown RBP eCLIP14.27□□□□□ -0.132e-7■□□□□ 10
SMC6-206ENST00000446852 NDUFA2O43678 99 aa14.26□□□□□ -0.13
SMC6-206ENST00000446852 IGKV1-16P04430 117 aa14.26□□□□□ -0.13
SMC6-206ENST00000446852 ARG1P05089 322 aa14.26□□□□□ -0.13
SMC6-206ENST00000446852 PDLIM3Q53GG5 364 aaPredicted RBP14.26□□□□□ -0.13
SMC6-206ENST00000446852 RPRMQ9NS64 109 aa14.26□□□□□ -0.13
SMC6-206ENST00000446852 TAGLNQ01995 201 aaKnown RBP14.26□□□□□ -0.13
SMC6-206ENST00000446852 TMEM155Q4W5P6 130 aa14.26□□□□□ -0.13
SMC6-206ENST00000446852 DPPA3Q6W0C5 159 aa14.26□□□□□ -0.13
SMC6-206ENST00000446852 OR10P1Q8NGE3 313 aa14.26□□□□□ -0.13
SMC6-206ENST00000446852 OR52E5Q8NH55 327 aa14.26□□□□□ -0.13
SMC6-206ENST00000446852 CFAP46Q8IYW2 2715 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 C15orf61A6NNL5 157 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 VDAC2P45880 294 aaPredicted RBP14.25□□□□□ -0.13
SMC6-206ENST00000446852 HNF4GQ14541 408 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 ZNF429Q86V71 674 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 SFT2D1Q8WV19 159 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 TMEM147Q9BVK8 224 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 MALRD1Q5VYJ5 2156 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 NPBWR1P48145 328 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 PPOXP50336 477 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 PEA15Q15121 130 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 PINX1Q96BK5 328 aaKnown RBP14.25□□□□□ -0.13
SMC6-206ENST00000446852 RARRES2Q99969 163 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 MRPL20Q9BYC9 149 aaKnown RBP14.25□□□□□ -0.13
SMC6-206ENST00000446852 HIPK2Q9H2X6 1198 aa14.25□□□□□ -0.13
SMC6-206ENST00000446852 TLE4Q04727 773 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 POU2AF1Q16633 256 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 ATP6V1FQ16864 119 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 SLC35D1Q9NTN3 355 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 TCF19Q9Y242 345 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 A0A1B0GW64 132 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 IGHV2-70P01814 119 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 GNB2P62879 340 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 ZNF726P1Q15940 193 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 VWC2Q2TAL6 325 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 SSX7Q7RTT5 188 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 C11orf42Q8N5U0 333 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 OR13D1Q8NGV5 346 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 PBDC1Q9BVG4 233 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 TMEM14BQ9NUH8 114 aa14.24□□□□□ -0.13
SMC6-206ENST00000446852 SRRM4A7MD48 611 aaKnown RBP14.23□□□□□ -0.13
SMC6-206ENST00000446852 LY6HO94772 140 aa14.23□□□□□ -0.13
SMC6-206ENST00000446852 SERF2P84101 59 aa14.23□□□□□ -0.13
SMC6-206ENST00000446852 HEYLQ9NQ87 328 aaPredicted RBP14.23□□□□□ -0.13
SMC6-206ENST00000446852 FOXA2Q9Y261 457 aaPredicted RBP14.23□□□□□ -0.13
SMC6-206ENST00000446852 BTBD17A6NE02 478 aa14.23□□□□□ -0.13
SMC6-206ENST00000446852 TSPAN4O14817 238 aa14.23□□□□□ -0.13
SMC6-206ENST00000446852 HRASP01112 189 aa14.23□□□□□ -0.13
SMC6-206ENST00000446852 MYOD1P15172 320 aa14.23□□□□□ -0.13
SMC6-206ENST00000446852 UQCRFS1P47985 274 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms