RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 C14orf144Q96I85 54 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 DERL1Q9BUN8 251 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 PXMP4Q9Y6I8 212 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 TMEM250H0YL14 139 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 NDUFB7P17568 137 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 RPL39P5Q59GN2 51 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 Q6ZS49 121 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 ODF3L1Q8IXM7 274 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 CMTM2Q8TAZ6 248 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 IMMP2LQ96T52 175 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 PARD6AQ9NPB6 346 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 TRBV24-1A0A075B6N3 115 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 FAM90A26D6RGX4 464 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 CLDN14O95500 239 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 IER3P46695 156 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 CD33P20138 364 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 PMCHP20382 165 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 PRDX2P32119 198 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 HES3Q5TGS1 186 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 DBX2Q6ZNG2 339 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 TGIF2LXQ8IUE1 241 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 ZBTB34Q8NCN2 500 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 TBX15Q96SF7 602 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 METRNQ9UJH8 293 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 PAM16Q9Y3D7 125 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 DDA1Q9BW61 102 aa9.96□□□□□ -0.81
MSH6-204ENST00000445503 SLC17A3O00476 420 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 CRISP2P16562 243 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 MOGAT3Q86VF5 341 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 GTF3AQ92664 365 aaKnown RBP9.96□□□□□ -0.82
MSH6-204ENST00000445503 ACY3Q96HD9 319 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 NAT8BQ9UHF3 227 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 ZNF318Q5VUA4 2279 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 A0A1B0GUS0 222 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 RAB29O14966 203 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 IRF2P14316 349 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 CBLN1P23435 193 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 NUBP1P53384 320 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 PSG5Q15238 335 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 ZNRF1Q8ND25 227 aa9.96□□□□□ -0.82
MSH6-204ENST00000445503 CHD3Q12873 2000 aaKnown RBP9.95□□□□□ -0.82
MSH6-204ENST00000445503 PDE6DO43924 150 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 FAM201AQ5SY85 155 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 PRR27Q6MZM9 219 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 BTF3L4Q96K17 158 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 CFAP54Q96N23 3096 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 GZMHP20718 246 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 SRSF7Q16629 238 aaKnown RBP eCLIP9.95□□□□□ -0.82
MSH6-204ENST00000445503 KIAA1644Q3SXP7 199 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 TIGITQ495A1 244 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 UNQ6494/PRO21346Q6UXR6 183 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 WDR86Q86TI4 376 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 LURAP1LQ8IV03 231 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 C11orf1Q9H5F2 150 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 IGHV1-2P23083 117 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 TMEM14EPQ6UXP3 125 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 SIGLECL1Q8N7X8 197 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 FAM216AQ8WUB2 273 aa9.95□□□□□ -0.82
MSH6-204ENST00000445503 SCO2A0A1W2PP80 73 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 IL3RAP26951 378 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 MZT1Q08AG7 82 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 VN1R17PQ8TDU5 208 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 HSPB7Q9UBY9 170 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 GALR2O43603 387 aaPredicted RBP9.94□□□□□ -0.82
MSH6-204ENST00000445503 TPPP2P59282 170 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 JOSD1Q15040 202 aaPredicted RBP9.94□□□□□ -0.82
MSH6-204ENST00000445503 CISD2Q8N5K1 135 aaKnown RBP9.94□□□□□ -0.82
MSH6-204ENST00000445503 GMPPAQ96IJ6 420 aaPredicted RBP9.94□□□□□ -0.82
MSH6-204ENST00000445503 PROCRQ9UNN8 238 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 MRPS18CQ9Y3D5 142 aaKnown RBP9.94□□□□□ -0.82
MSH6-204ENST00000445503 WIPI2Q9Y4P8 454 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 SNURFLB1AK76 121 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 C21orf140B9A014 251 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 OR10J4P0C629 311 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 CCKARP32238 428 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 RHOBP62745 196 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 MRPL54Q6P161 138 aaKnown RBP9.94□□□□□ -0.82
MSH6-204ENST00000445503 OR1L6Q8NGR2 347 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 MISP3Q96FF7 219 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 PRDM13Q9H4Q3 707 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 OR6C3Q9NZP0 311 aa9.94□□□□□ -0.82
MSH6-204ENST00000445503 TRAV34A0A0B4J273 112 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 LINC00473A8K010 186 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 IFNL4K9M1U5 179 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 SLC31A2O15432 143 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 NKX2-8O15522 239 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 OR9G9P0C7N8 305 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 SRP14P37108 136 aaKnown RBP9.93□□□□□ -0.82
MSH6-204ENST00000445503 RND2P52198 227 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 VWA1Q6PCB0 445 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 FAM214BQ7L5A3 538 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 H1FXQ92522 213 aaKnown RBP9.93□□□□□ -0.82
MSH6-204ENST00000445503 RND1Q92730 232 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 KCNIP2Q9NS61 270 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 TMEM242Q9NWH2 141 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 TIMM9Q9Y5J7 89 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 CELSR3Q9NYQ7 3312 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 TMEM210A6NLX4 147 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 NPY1RP25929 384 aa9.93□□□□□ -0.82
MSH6-204ENST00000445503 INO80CQ6PI98 192 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms