RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PPT1P50897 306 aa11.27□□□□□ -0.6
RBM39-216ENST00000444878 TMEM30BQ3MIR4 351 aa11.27□□□□□ -0.6
RBM39-216ENST00000444878 RSG1Q9BU20 258 aa11.27□□□□□ -0.6
RBM39-216ENST00000444878 DNASE2O00115 360 aaPredicted RBP11.27□□□□□ -0.61
RBM39-216ENST00000444878 MMP23AO75900 390 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 IFNA17P01571 189 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 NQO2P16083 231 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 RPL31P62899 125 aaKnown RBP11.27□□□□□ -0.61
RBM39-216ENST00000444878 MRPS11P82912 194 aaKnown RBP11.27□□□□□ -0.61
RBM39-216ENST00000444878 TLE4Q04727 773 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 LRRC75BQ2VPJ9 315 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 FBXL19-AS1Q494R0 122 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 SPINK9Q5DT21 86 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 DPPA3Q6W0C5 159 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 C1orf229Q6ZS94 237 aaPredicted RBP11.27□□□□□ -0.61
RBM39-216ENST00000444878 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
RBM39-216ENST00000444878 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 OR4S2Q8NH73 311 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 OR4C12Q96R67 309 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 SCRT1Q9BWW7 348 aa11.27□□□□□ -0.61
RBM39-216ENST00000444878 QTRT1Q9BXR0 403 aaKnown RBP11.27□□□□□ -0.61
RBM39-216ENST00000444878 BTBD17A6NE02 478 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 FAM74A7A6NL05 159 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 THBS3P49746 956 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 OR2B8PP59922 312 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 MEF2CQ06413 473 aaPredicted RBP11.26□□□□□ -0.61
RBM39-216ENST00000444878 FAM74A3Q4VXF1 159 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 VKORC1L1Q8N0U8 176 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 ZNF439Q8NDP4 499 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 DDB2Q92466 427 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 PSMG3Q9BT73 122 aaPredicted RBP11.26□□□□□ -0.61
RBM39-216ENST00000444878 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
RBM39-216ENST00000444878 GAL3ST2Q9H3Q3 398 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
RBM39-216ENST00000444878 UBE2L5PA0A1B0GUS4 154 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 PPIHO43447 177 aaKnown RBP11.26□□□□□ -0.61
RBM39-216ENST00000444878 OR8U8P0C7N1 319 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 RAB2AP61019 212 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 EFNB3Q15768 340 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 SPSB3Q6PJ21 355 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 OR10P1Q8NGE3 313 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 SFT2D1Q8WV19 159 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 ADTRPQ96IZ2 230 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 ZNF251Q9BRH9 671 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 KPTNQ9Y664 436 aa11.26□□□□□ -0.61
RBM39-216ENST00000444878 NDUFB3O43676 98 aa11.25□□□□□ -0.61
RBM39-216ENST00000444878 PLAUP00749 431 aa11.25□□□□□ -0.61
RBM39-216ENST00000444878 GRNP28799 593 aaKnown RBP11.25□□□□□ -0.61
RBM39-216ENST00000444878 CCL20P78556 96 aa11.25□□□□□ -0.61
RBM39-216ENST00000444878 ATP6V1FQ16864 119 aa11.25□□□□□ -0.61
RBM39-216ENST00000444878 FAM209BQ5JX69 171 aa11.25□□□□□ -0.61
RBM39-216ENST00000444878 TAF15Q92804 592 aaKnown RBP eCLIP11.25□□□□□ -0.615e-6■□□□□ 8.5
RBM39-216ENST00000444878 PINX1Q96BK5 328 aaKnown RBP11.25□□□□□ -0.61
RBM39-216ENST00000444878 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
RBM39-216ENST00000444878 CISD1Q9NZ45 108 aaKnown RBP11.25□□□□□ -0.61
RBM39-216ENST00000444878 TNCP24821 2201 aa11.25□□□□□ -0.61
RBM39-216ENST00000444878 A0A1B0GW64 132 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 NPBWR1P48145 328 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 SERF2P84101 59 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 LRRC10Q5BKY1 277 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 SLC25A48Q6ZT89 311 aaKnown RBP11.24□□□□□ -0.61
RBM39-216ENST00000444878 H1FXQ92522 213 aaKnown RBP11.24□□□□□ -0.61
RBM39-216ENST00000444878 ZNF714Q96N38 554 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 TMEM140Q9NV12 185 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
RBM39-216ENST00000444878 HBE1P02100 147 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 SPCS3P61009 180 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 TMEM88Q6PEY1 159 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 LYPD2Q6UXB3 125 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 OR10A7Q8NGE5 316 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 TMEM147Q9BVK8 224 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 RPRMQ9NS64 109 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 KIAA1456Q9P272 454 aa11.24□□□□□ -0.61
RBM39-216ENST00000444878 IGHV1-69-2A0A0G2JMI3 117 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 RBFOX3A6NFN3 312 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 PMS2P5A8MQ11 134 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 LY86O95711 162 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 C1QTNF9P0C862 333 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 DAOP14920 347 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 CCL3L1P16619 93 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 ERVFRD-1P60508 538 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 RPS16P62249 146 aaKnown RBP11.23□□□□□ -0.61
RBM39-216ENST00000444878 ADORA2A-AS1P86434 159 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 TMEM200BQ69YZ2 307 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 HEPN1Q6WQI6 88 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 ZNF383Q8NA42 475 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 CA5BP1Q8WTZ4 195 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 RBMXL1Q96E39 390 aaKnown RBP11.23□□□□□ -0.61
RBM39-216ENST00000444878 RARRES2Q99969 163 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 SMDT1Q9H4I9 107 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 TNFRSF13BO14836 293 aaPredicted RBP11.23□□□□□ -0.61
RBM39-216ENST00000444878 FCN3O75636 299 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 RELBQ01201 579 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 MUC15Q8N387 334 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 CLRN3Q8NCR9 226 aa11.23□□□□□ -0.61
RBM39-216ENST00000444878 HIPK2Q9H2X6 1198 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms