RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 ANKHD1Q8IWZ3 2542 aaKnown RBP11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 AGAP20933 346 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 RPL39P5Q59GN2 51 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 GPHA2Q96T91 129 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 SLC35B3Q9H1N7 401 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 PHOX2AO14813 284 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 LILRA1O75019 489 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 MGST1P10620 155 aaKnown RBP11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 FAM162BQ5T6X4 162 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 FAM166AQ6J272 317 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 SMIM15Q7Z3B0 74 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 TMEM133Q9H2Q1 129 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 TMEM140Q9NV12 185 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 DOK5Q9P104 306 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 GNG13Q9P2W3 67 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 PTPN13Q12923 2485 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 NDUFS8O00217 210 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 NTF4P34130 210 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 KLHDC1Q8N7A1 406 aa11.81□□□□□ -0.52
SMARCA4-204ENST00000444061 TRAV40A0A0B4J280 105 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 COL8A2P25067 703 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 FFAR4Q5NUL3 377 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 FGFRL1Q8N441 504 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 OR1L4Q8NGR5 311 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 MRPL30Q8TCC3 161 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 FBLN5Q9UBX5 448 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 SPP1P10451 314 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 CXCL3P19876 107 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 BTNL8Q6UX41 500 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 LOXL3P58215 753 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 SPCS3P61009 180 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 Q5PR19 223 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 Q8NA96 180 aa11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.8□□□□□ -0.52
SMARCA4-204ENST00000444061 TRAV24A0A0B4J272 114 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 IGKV1-12A0A0C4DH73 117 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 IGKV1D-12P01611 117 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 SELLP14151 372 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 CYB5R2Q6BCY4 276 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 SLC24A4Q8NFF2 622 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 SH2D7A6NKC9 451 aaPredicted RBP11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 MLNRO43193 412 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 IGKV1D-33P01593 117 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 IGKV1-33P01594 117 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 MELTFP08582 738 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 SLC25A4P12235 298 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 UCP3P55916 312 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 ZNF345Q14585 488 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 HCP5Q6MZN7 132 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 PRB3Q04118 309 aaPredicted RBP11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 FXYD3Q14802 87 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 OR10D4PQ8NGN7 298 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 GRNP28799 593 aaKnown RBP11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 ZNF273Q14593 569 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 SMIM7Q9BQ49 75 aa11.79□□□□□ -0.52
SMARCA4-204ENST00000444061 CLDN34H7C241 214 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 KBTBD11O94819 623 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 P2RY1P47900 373 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 MIDNQ504T8 468 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 TMEM42Q69YG0 159 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 ZNF818PQ6ZRF7 136 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 RXFP4Q8TDU9 374 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 CORTO00230 105 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 TDGF1P3P51864 188 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 ZP1P60852 638 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 ZNF146Q15072 292 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 TIGITQ495A1 244 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 ZNF429Q86V71 674 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 OR1B1Q8NGR6 318 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 IGLV1-44P01699 117 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 HSPE1P61604 102 aaKnown RBP11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 COLCA1Q6ZS62 124 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 DMRTA2Q96SC8 542 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 TMEM131Q92545 1883 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 S1PR2O95136 353 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 DMRTC2Q8IXT2 367 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-204ENST00000444061 F12P00748 615 aaPredicted RBP11.77□□□□□ -0.52
SMARCA4-204ENST00000444061 OR8I2Q8N0Y5 310 aa11.77□□□□□ -0.52
SMARCA4-204ENST00000444061 OSR1Q8TAX0 266 aaPredicted RBP11.77□□□□□ -0.52
SMARCA4-204ENST00000444061 LYRM2Q9NU23 88 aaPredicted RBP11.77□□□□□ -0.52
SMARCA4-204ENST00000444061 SLC45A2Q9UMX9 530 aa11.77□□□□□ -0.52
SMARCA4-204ENST00000444061 KLF2Q9Y5W3 355 aaPredicted RBP11.77□□□□□ -0.52
SMARCA4-204ENST00000444061 SPTBN4Q9H254 2564 aa11.77□□□□□ -0.52
SMARCA4-204ENST00000444061 RNF223E7ERA6 249 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 RHOBP62745 196 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 ZNF497Q6ZNH5 498 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 PDPNQ86YL7 162 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 TPPP3Q9BW30 176 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 QTRT1Q9BXR0 403 aaKnown RBP11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 NPFFR1Q9GZQ6 430 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 IGKV3-7A0A075B6H7 116 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 IGKV1-27A0A075B6S5 117 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 NPIPB11E5RHQ5 1161 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 CD74P04233 296 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms