RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SSBP3Q9BWW4 388 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-214ENST00000441542 RNASE7Q9H1E1 156 aaKnown RBP6.36□□□□□ -1.39
HDAC9-214ENST00000441542 TMEM160Q9NX00 188 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 C19orf25Q9UFG5 118 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-214ENST00000441542 PTPRZ1P23471 2315 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-214ENST00000441542 A0A096LPE4 126 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 IGHV2OR16-5A0A0B4J2B6 119 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 A0A1W2PPZ6 126 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 A0A1W2PQD3 144 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 K7EP13 123 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 SYNGR1O43759 233 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 IGHV3-13P01766 116 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 IGHV3-7P01780 117 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 ARL14EPLP0DKL9 152 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 TIMP3P35625 211 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 ZNF83P51522 516 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 OR1D5P58170 312 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 ACSF3Q4G176 576 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-214ENST00000441542 VWA1Q6PCB0 445 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 MMD2Q8IY49 270 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 OR1L3Q8NH93 324 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 CLDN23Q96B33 292 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 CITED1Q99966 193 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 PSMG3Q9BT73 122 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-214ENST00000441542 TPPP3Q9BW30 176 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 CLEC7AQ9BXN2 247 aa6.36□□□□□ -1.39
HDAC9-214ENST00000441542 HSBP1O75506 76 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 HNRNPA1P09651 372 aaKnown RBP eCLIP6.35□□□□□ -1.39
HDAC9-214ENST00000441542 CD99P14209 185 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 DRD1P21728 446 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 KIR2DL1P43626 348 aaPredicted RBP6.35□□□□□ -1.39
HDAC9-214ENST00000441542 TMEM211Q6ICI0 200 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 SLC23A3Q6PIS1 610 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 KLHDC1Q8N7A1 406 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 FGFBP3Q8TAT2 258 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 VCX2Q9H322 139 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 KIAA1549Q9HCM3 1950 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 A0A1W2PS18 150 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 RAMP3O60896 148 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 GABRA2P47869 451 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 FASLGP48023 281 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 HYAL1Q12794 435 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 MIC13Q5XKP0 118 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 CACNG8Q8WXS5 425 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 LRRC61Q9BV99 259 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 QTRT1Q9BXR0 403 aaKnown RBP6.35□□□□□ -1.39
HDAC9-214ENST00000441542 GP6Q9HCN6 339 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 FRYQ5TBA9 3013 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 USF3Q68DE3 2245 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 TRANK1O15050 2925 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 NBEAQ8NFP9 2946 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 MUC21A0A0G2JKD1 596 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 MUC21A0A140T8X8 626 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 hDV102S1A0JD36 115 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 CA2P00918 260 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 CD24P25063 80 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 CA7P43166 264 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 CAMPP49913 170 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 HOXA4Q00056 320 aaPredicted RBP6.35□□□□□ -1.39
HDAC9-214ENST00000441542 PSG7Q13046 419 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 GABRA6Q16445 453 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 MUC21Q5SSG8 566 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 LINC00696Q6ZRV3 163 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 TMEM144Q7Z5S9 345 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 FGFRL1Q8N441 504 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 GMPPAQ96IJ6 420 aaPredicted RBP6.35□□□□□ -1.39
HDAC9-214ENST00000441542 HINT2Q9BX68 163 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 NPCDR1Q9BY65 106 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 ZNF576Q9H609 170 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 TRAPPC2LQ9UL33 140 aa6.35□□□□□ -1.39
HDAC9-214ENST00000441542 BDP1A6H8Y1 2624 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 ABCA7Q8IZY2 2146 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 FBLL1A6NHQ2 334 aaKnown RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 TRAPPC2LH3BP13 241 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 M0R2Z0 102 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 TNFSF11O14788 317 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 APOA2P02652 100 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 RPL31P62899 125 aaKnown RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 PDLIM3Q53GG5 364 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 Q8N976 141 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 C1orf162Q8NEQ5 155 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 OR1F12Q8NHA8 337 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 TMEM147Q9BVK8 224 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 CSTL1Q9H114 145 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 ZNF430Q9H8G1 570 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 OR2W1Q9Y3N9 320 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 IGHV2-70DA0A0C4DH43 119 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 GNG7O60262 68 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 CELA2AP08217 269 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 PRB4P10163 310 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 IGLL1P15814 213 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 GATA2P23769 480 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 ATP5IP56385 69 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 RPEL1Q2QD12 228 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 RNFT1Q5M7Z0 435 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 SPATA31B1PQ5VZV4 182 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 KIR3DL3Q8N743 410 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 ABHD3Q8WU67 409 aa6.34□□□□□ -1.39
HDAC9-214ENST00000441542 SSBP4Q9BWG4 385 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-214ENST00000441542 PRO3102Q9H379 93 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms