RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 RHOVQ96L33 236 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 RNF5Q99942 180 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 MXRA5Q9NR99 2828 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 A0A0G2JRQ6 117 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 MPTX1A8MV57 137 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 IGKV1D-33P01593 117 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 IGKV1-33P01594 117 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 SNRNP70P08621 437 aaKnown RBP16.91■□□□□ 0.3
VPS13B-204ENST00000441350 CD24P25063 80 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 H2BFSP57053 126 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 IL17RELQ6ZVW7 336 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 EAF1Q96JC9 268 aaPredicted RBP16.91■□□□□ 0.3
VPS13B-204ENST00000441350 HARBI1Q96MB7 349 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 NAV3Q8IVL0 2385 aa16.91■□□□□ 0.3
VPS13B-204ENST00000441350 SONP18583 2426 aaKnown RBP16.91■□□□□ 0.3
VPS13B-204ENST00000441350 SIX6O95475 246 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 MOSP00540 346 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 IFNA21P01568 189 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 IGLV2-23P01705 113 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 LGALS7P47929 136 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 AKR1C2P52895 323 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 RPS16P62249 146 aaKnown RBP16.9■□□□□ 0.3
VPS13B-204ENST00000441350 DEFB112Q30KQ8 113 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 FBLN7Q53RD9 439 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 VKORC1L1Q8N0U8 176 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 PIFOQ8TCI5 191 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 RRNAD1Q96FB5 475 aaKnown RBP16.9■□□□□ 0.3
VPS13B-204ENST00000441350 AIFM2Q9BRQ8 373 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 MMP24Q9Y5R2 645 aa16.9■□□□□ 0.3
VPS13B-204ENST00000441350 AANATQ16613 207 aa16.89■□□□□ 0.29
VPS13B-204ENST00000441350 FAM219AQ8IW50 185 aa16.89■□□□□ 0.29
VPS13B-204ENST00000441350 Q8N6K4 173 aa16.89■□□□□ 0.29
VPS13B-204ENST00000441350 OR2T10Q8NGZ9 312 aa16.89■□□□□ 0.29
VPS13B-204ENST00000441350 C22orf15Q8WYQ4 148 aa16.89■□□□□ 0.29
VPS13B-204ENST00000441350 GPR146Q96CH1 333 aa16.89■□□□□ 0.29
VPS13B-204ENST00000441350 OR10C1Q96KK4 312 aa16.89■□□□□ 0.29
VPS13B-204ENST00000441350 IL6RP08887 468 aaPredicted RBP16.88■□□□□ 0.29
VPS13B-204ENST00000441350 FAM106CPP0CH98 169 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 ERVK-16P61578 105 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 TUSC1Q2TAM9 212 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 LRRC75BQ2VPJ9 315 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 GSG1LQ6UXU4 331 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 DMBX1Q8NFW5 382 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 RNASE11Q8TAA1 199 aaKnown RBP16.88■□□□□ 0.29
VPS13B-204ENST00000441350 SSX3Q99909 188 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 MDFIC2A0A1B0GVS7 189 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 FAM25EA8MYX2 175 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 OR2A4O95047 310 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 HNF1AP20823 631 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 HES1Q14469 280 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 IZUMO4Q1ZYL8 232 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 OR4A47Q6IF82 309 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 CLEC9AQ6UXN8 241 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 Q6ZRM9 215 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 SSX9Q7RTT3 188 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 H2BFWTQ7Z2G1 175 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 OR2A7Q96R45 310 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 TSNAXQ99598 290 aaKnown RBP16.88■□□□□ 0.29
VPS13B-204ENST00000441350 PRDM13Q9H4Q3 707 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 TMEM140Q9NV12 185 aa16.88■□□□□ 0.29
VPS13B-204ENST00000441350 C13orf42A0A1B0GVH6 325 aa16.87■□□□□ 0.29
VPS13B-204ENST00000441350 C5orf51A6NDU8 294 aa16.87■□□□□ 0.29
VPS13B-204ENST00000441350 SAA1P0DJI8 122 aaPredicted RBP16.87■□□□□ 0.29
VPS13B-204ENST00000441350 SLC25A6P12236 298 aa16.87■□□□□ 0.29
VPS13B-204ENST00000441350 CNTFRP26992 372 aa16.87■□□□□ 0.29
VPS13B-204ENST00000441350 SRP14P37108 136 aaKnown RBP16.87■□□□□ 0.29
VPS13B-204ENST00000441350 SRSF4Q08170 494 aaKnown RBP16.87■□□□□ 0.29
VPS13B-204ENST00000441350 HNF4GQ14541 408 aa16.87■□□□□ 0.29
VPS13B-204ENST00000441350 PUSL1Q8N0Z8 303 aaKnown RBP16.87■□□□□ 0.29
VPS13B-204ENST00000441350 ZNF436Q9C0F3 470 aaPredicted RBP16.87■□□□□ 0.29
VPS13B-204ENST00000441350 A0A1B0GU03 582 aa16.86■□□□□ 0.29
VPS13B-204ENST00000441350 UBE2KP61086 200 aa16.86■□□□□ 0.29
VPS13B-204ENST00000441350 IAH1Q2TAA2 248 aaPredicted RBP16.86■□□□□ 0.29
VPS13B-204ENST00000441350 NPBQ8NG41 125 aa16.86■□□□□ 0.29
VPS13B-204ENST00000441350 C2orf50Q96LR7 162 aa16.86■□□□□ 0.29
VPS13B-204ENST00000441350 ZNF48Q96MX3 618 aaPredicted RBP16.86■□□□□ 0.29
VPS13B-204ENST00000441350 BET1LQ9NYM9 111 aa16.86■□□□□ 0.29
VPS13B-204ENST00000441350 ANK3Q12955 4377 aaKnown RBP16.86■□□□□ 0.29
VPS13B-204ENST00000441350 CRYGBP07316 175 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 OR9G9P0C7N8 305 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 F2RL1P55085 397 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 PSG5Q15238 335 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 WDR89Q96FK6 387 aaPredicted RBP16.85■□□□□ 0.29
VPS13B-204ENST00000441350 SPIN2AQ99865 258 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 SPIN2BQ9BPZ2 258 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 PLSCR3Q9NRY6 295 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 CACNG5Q9UF02 275 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 SLC25A17O43808 307 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 PITX3O75364 302 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 SPDEFO95238 335 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 TMEM11P17152 192 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 CD83Q01151 205 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 IL15RAQ13261 267 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 SMCO1Q147U7 214 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 VMA21Q3ZAQ7 101 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 TEX45Q8NA69 505 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 COA4Q9NYJ1 87 aa16.85■□□□□ 0.29
VPS13B-204ENST00000441350 HIVEP2P31629 2446 aa16.84■□□□□ 0.29
VPS13B-204ENST00000441350 TRAV3A0A0B4J244 114 aa16.84■□□□□ 0.29
VPS13B-204ENST00000441350 H3BUX3 64 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms