RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-208ENST00000441141 CXCR4P61073 352 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 MED21Q13503 144 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 LGALS9BQ3B8N2 356 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 FAM78BQ5VT40 261 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 ZNF705AQ6ZN79 300 aaPredicted RBP1.06□□□□□ -2.24
VPS8-208ENST00000441141 NAA40Q86UY6 237 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 ZNF675Q8TD23 568 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 CMTM5Q96DZ9 223 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 KCTD7Q96MP8 289 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 NMNAT3Q96T66 252 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 CYSTM1Q9H1C7 97 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 XAGE1AQ9HD64 81 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 EURLQ9NYK6 297 aa1.06□□□□□ -2.24
VPS8-208ENST00000441141 TINCRA0A1B0GVN0 87 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 HMSDA8MTL9 139 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 BIRC5O15392 142 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 APOMO95445 188 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 SERPINA7P05543 415 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 IL9P15248 144 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 CCR2P41597 374 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 HAAOP46952 286 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 SKP1P63208 163 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 JOSD1Q15040 202 aaPredicted RBP1.05□□□□□ -2.24
VPS8-208ENST00000441141 ZNF791Q3KP31 576 aaPredicted RBP1.05□□□□□ -2.24
VPS8-208ENST00000441141 C9orf64Q5T6V5 341 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 C5orf46Q6UWT4 87 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 Q6ZRN7 208 aaPredicted RBP1.05□□□□□ -2.24
VPS8-208ENST00000441141 RASSF6Q6ZTQ3 369 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 KTN1-AS1Q86SY8 53 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 RIBC1Q8N443 379 aaPredicted RBP1.05□□□□□ -2.24
VPS8-208ENST00000441141 TMEM251Q8N6I4 163 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 UBL4BQ8N7F7 174 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 RAB2BQ8WUD1 216 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 ASB17Q8WXJ9 295 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 ZNF514Q96K75 400 aaPredicted RBP1.05□□□□□ -2.24
VPS8-208ENST00000441141 CCL13Q99616 98 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 DERL2Q9GZP9 239 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 HDHD2Q9H0R4 259 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 VCX3BQ9H321 246 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 POLR1DQ9Y2S0 133 aa1.05□□□□□ -2.24
VPS8-208ENST00000441141 RP1L1Q8IWN7 2480 aaPredicted RBP1.05□□□□□ -2.24
VPS8-208ENST00000441141 SIPA1L1O43166 1804 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 A0A0A6YYH2 397 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 A6NJ64 397 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 DISC1C4P0D8 188 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 GOLGA8KD6RF30 607 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 GOLGA8MH3BSY2 632 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 KRT75O95678 551 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 C1QCP02747 245 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 IL3P08700 152 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 AKR1C3P42330 323 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 MAP3K7CLP57077 242 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 UBE2G2P60604 165 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 CST9Q5W186 159 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 PDPK2PQ6A1A2 396 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 TMEM86AQ8N2M4 240 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 OR51T1Q8NGJ9 327 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 OR1L8Q8NGR8 309 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 SPACA4Q8TDM5 124 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 HAVCR2Q8TDQ0 301 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 DNAJB3Q8WWF6 145 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 OR51I2Q9H344 312 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 AK3Q9UIJ7 227 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 SOX21Q9Y651 276 aaPredicted RBP1.04□□□□□ -2.24
VPS8-208ENST00000441141 PTPRBP23467 1997 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 REREQ9P2R6 1566 aa1.04□□□□□ -2.24
VPS8-208ENST00000441141 IGKV2-40A0A087WW87 121 aaPredicted RBP1.03□□□□□ -2.24
VPS8-208ENST00000441141 C1orf232A0A0U1RR37 186 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 H7C2G1 150 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 COX7A2LO14548 114 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 ITGB1BP1O14713 200 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 PFDN6O15212 129 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 PGLYRP1O75594 196 aaPredicted RBP1.03□□□□□ -2.24
VPS8-208ENST00000441141 IGKV2D-40P01614 121 aaPredicted RBP1.03□□□□□ -2.24
VPS8-208ENST00000441141 OCM2P0CE71 109 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 ZNF705DP0CH99 300 aaPredicted RBP1.03□□□□□ -2.24
VPS8-208ENST00000441141 ZNF705BP0CI00 300 aaPredicted RBP1.03□□□□□ -2.24
VPS8-208ENST00000441141 MYL12AP19105 171 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 EVX1P49640 407 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 POLR2GP62487 172 aaKnown RBP eCLIP1.03□□□□□ -2.24
VPS8-208ENST00000441141 DMTNQ08495 405 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 LRRC75BQ2VPJ9 315 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 SBSNQ6UWP8 590 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 HIST2H3AQ71DI3 136 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 GPHB5Q86YW7 130 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 TBC1D19Q8N5T2 526 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 GNPNAT1Q96EK6 184 aaPredicted RBP1.03□□□□□ -2.24
VPS8-208ENST00000441141 HSPB9Q9BQS6 159 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 DRC3Q9H069 523 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 PLEKHJ1Q9NW61 149 aa1.03□□□□□ -2.24
VPS8-208ENST00000441141 AMMECR1Q9Y4X0 333 aaPredicted RBP1.03□□□□□ -2.24
VPS8-208ENST00000441141 ZFHX2Q9C0A1 2572 aaPredicted RBP1.02□□□□□ -2.25
VPS8-208ENST00000441141 HELZ2Q9BYK8 2649 aaKnown RBP1.02□□□□□ -2.25
VPS8-208ENST00000441141 TRAV7A0A075B6U4 112 aa1.02□□□□□ -2.25
VPS8-208ENST00000441141 TMED7-TICAM2A0A0A6YYA0 188 aa1.02□□□□□ -2.25
VPS8-208ENST00000441141 TRAV38-1A0A0B4J264 116 aa1.02□□□□□ -2.25
VPS8-208ENST00000441141 IGHV1-18A0A0C4DH31 117 aa1.02□□□□□ -2.25
VPS8-208ENST00000441141 IGHV1-69-2A0A0G2JMI3 117 aa1.02□□□□□ -2.25
VPS8-208ENST00000441141 A8MUN3 132 aa1.02□□□□□ -2.25
VPS8-208ENST00000441141 CAV1Q03135 178 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms