RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 DOHHQ9BU89 302 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 UPF3BQ9BZI7 483 aaKnown RBP1.43□□□□□ -2.18
PFDN4-202ENST00000441080 TIMM9Q9Y5J7 89 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 ZNF737O75373 536 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 AP1S1P61966 158 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 MGAT3Q09327 533 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 KTN1-AS1Q86SY8 53 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 KCTD7Q96MP8 289 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 IMMP2LQ96T52 175 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 CCL13Q99616 98 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 MED13Q9UHV7 2174 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 KIAA2026Q5HYC2 2103 aa1.42□□□□□ -2.18
PFDN4-202ENST00000441080 HELZ2Q9BYK8 2649 aaKnown RBP1.41□□□□□ -2.18
PFDN4-202ENST00000441080 DISP1Q96F81 1524 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 F5H768 121 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 CREBL2O60519 120 aaPredicted RBP1.41□□□□□ -2.18
PFDN4-202ENST00000441080 APOMO95445 188 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 LYNX1P0DP58 116 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 PSMB8P28062 276 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 DDTP30046 118 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 SLCO1A2P46721 670 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 EMP1P54849 157 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 TPI1P60174 286 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 TMEM251Q8N6I4 163 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 EEF1AKMT1Q8WVE0 214 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 RBM7Q9Y580 266 aaKnown RBP1.41□□□□□ -2.18
PFDN4-202ENST00000441080 ABCC12Q96J65 1359 aa1.41□□□□□ -2.18
PFDN4-202ENST00000441080 CHD5Q8TDI0 1954 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 A0A0J9YW62 118 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 A0A1B0GW54 56 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 GOLGA8KD6RF30 607 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 GOLGA8MH3BSY2 632 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 COX7A2LO14548 114 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 CD40LGP29965 261 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 CDC34P49427 236 aaPredicted RBP1.4□□□□□ -2.19
PFDN4-202ENST00000441080 AKR1C1Q04828 323 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 SBSNQ6UWP8 590 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 UBL4BQ8N7F7 174 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 CMTM5Q96DZ9 223 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 GNPNAT1Q96EK6 184 aaPredicted RBP1.4□□□□□ -2.19
PFDN4-202ENST00000441080 HSPB9Q9BQS6 159 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 HRASLSQ9HDD0 168 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 IMP3Q9NV31 184 aaKnown RBP1.4□□□□□ -2.19
PFDN4-202ENST00000441080 NUP160Q12769 1436 aa1.4□□□□□ -2.19
PFDN4-202ENST00000441080 MEIKINA0A087WXM9 373 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 IGHV1-18A0A0C4DH31 117 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 TMEM269A0A1B0GVZ9 245 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 HMSDA8MTL9 139 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 COCHO43405 550 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 SERPINA7P05543 415 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 IL3P08700 152 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 PPP1R1AQ13522 171 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 LRRC75BQ2VPJ9 315 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 SLC36A2Q495M3 483 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 TNFAIP8L2Q6P589 184 aaPredicted RBP1.39□□□□□ -2.19
PFDN4-202ENST00000441080 Q8N402 240 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 OR2T27Q8NH04 317 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 JOSD2Q8TAC2 188 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 HAVCR2Q8TDQ0 301 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 Q96M85 177 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 CYSTM1Q9H1C7 97 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 CST9LQ9H4G1 147 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 PLEKHJ1Q9NW61 149 aa1.39□□□□□ -2.19
PFDN4-202ENST00000441080 KMT2BQ9UMN6 2715 aaPredicted RBP1.39□□□□□ -2.19
PFDN4-202ENST00000441080 TRAV7A0A075B6U4 112 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 TRBV6-5A0A0K0K1A5 114 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 H3BT86 120 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 H7C2G1 150 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 SSNA1O43805 119 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 HLA-DRAP01903 254 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 LGALS1P09382 135 aaKnown RBP1.38□□□□□ -2.19
PFDN4-202ENST00000441080 ALDH3A1P30838 453 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 AKR1C3P42330 323 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 RPL30P62888 115 aaKnown RBP1.38□□□□□ -2.19
PFDN4-202ENST00000441080 FAM78BQ5VT40 261 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 CST9Q5W186 159 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 PDPK2PQ6A1A2 396 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 SLC36A1Q7Z2H8 476 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 DKKL1Q9UK85 242 aa1.38□□□□□ -2.19
PFDN4-202ENST00000441080 CUL9Q8IWT3 2517 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 TRAV38-1A0A0B4J264 116 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 F8W036 122 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 ITGB1BP1O14713 200 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 TFPTP0C1Z6 253 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 DEFA4P12838 97 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 GPX2P18283 190 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 RPL28P46779 137 aaKnown RBP1.37□□□□□ -2.19
PFDN4-202ENST00000441080 RAB14P61106 215 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 HIST2H3AQ71DI3 136 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 SLC51BQ86UW2 128 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 FAM9CQ8IZT9 166 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 C10orf105Q8TEF2 133 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 CXorf21Q9HAI6 301 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 NAT8Q9UHE5 227 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 PRELID1Q9Y255 219 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 POLR1DQ9Y2S0 133 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 C15orf41Q9Y2V0 281 aa1.37□□□□□ -2.19
PFDN4-202ENST00000441080 RTTNQ86VV8 2226 aa1.36□□□□□ -2.19
PFDN4-202ENST00000441080 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
PFDN4-202ENST00000441080 C1orf232A0A0U1RR37 186 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms