RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SAA1P0DJI8 122 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 ZP3P21754 424 aa15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 SSBP2P81877 361 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 OR6Q1Q8NGQ2 317 aa15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 SRSF12Q8WXF0 261 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 RHOVQ96L33 236 aa15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 HSD17B10Q99714 261 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 RSRP1Q9BUV0 290 aa15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 ELOVL1Q9BW60 279 aa15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 RANGRFQ9HD47 186 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 TAS2R8Q9NYW2 309 aa15.32■□□□□ 0.04
SHROOM1-204ENST00000440118 IGKV1D-13A0A0B4J2D9 117 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 MSGN1A6NI15 193 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 FCER2P06734 321 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 IGKV1-13P0DP09 117 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 AADACP22760 399 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 LSM3P62310 102 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 DEFA5Q01523 94 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 CDK10Q15131 360 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 MMD2Q8IY49 270 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 OR13F1Q8NGS4 319 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 SECTM1Q8WVN6 248 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 IFT46Q9NQC8 304 aa15.31■□□□□ 0.04
SHROOM1-204ENST00000440118 TMEM127O75204 238 aa15.3■□□□□ 0.04
SHROOM1-204ENST00000440118 FCGR2CP31995 323 aa15.3■□□□□ 0.04
SHROOM1-204ENST00000440118 GVQW1Q8N7I0 195 aa15.3■□□□□ 0.04
SHROOM1-204ENST00000440118 TINAGL1Q9GZM7 467 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-204ENST00000440118 ZNF430Q9H8G1 570 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-204ENST00000440118 NOL3O60936 208 aaKnown RBP15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 OR9G9P0C7N8 305 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 TGFBR1P36897 503 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 CBX5P45973 191 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 UBE2NLQ5JXB2 153 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 ACSM6Q6P461 480 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 OVCH2Q7RTZ1 564 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 HOGA1Q86XE5 327 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 VSTM2AQ8TAG5 236 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 S100A16Q96FQ6 103 aaKnown RBP15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 SPIN2AQ99865 258 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 SPIN2BQ9BPZ2 258 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 AUNIPQ9H7T9 357 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 LSM4Q9Y4Z0 139 aaKnown RBP15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 SMAD5-AS1Q9Y6J3 95 aa15.29■□□□□ 0.04
SHROOM1-204ENST00000440118 MEIS3P1A6NDR6 274 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 TRIM64CA6NLI5 447 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 TNFSF12O43508 249 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 PTHLHP12272 177 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 KIR2DS2P43631 304 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 FXYD4P59646 89 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 RPL30P62888 115 aaKnown RBP15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 TMEM69Q5SWH9 247 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 ZNF66Q6ZN08 573 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 GPR141Q7Z602 305 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 ANKRD13BQ86YJ7 626 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 VKORC1L1Q8N0U8 176 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 USMG5Q96IX5 58 aa15.28■□□□□ 0.04
SHROOM1-204ENST00000440118 ZNF701M0R085 212 aaPredicted RBP15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 PPYP01298 95 aa15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 NHLRC4P0CG21 123 aaPredicted RBP15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 SPNP16150 400 aa15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 HERV-K104P61576 105 aa15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 SAMD12Q8N8I0 201 aa15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 ADAD2Q8NCV1 583 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 SLC5A7Q9GZV3 580 aa15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 PEF1Q9UBV8 284 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-204ENST00000440118 KBTBD11O94819 623 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 OR2A4O95047 310 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 HRASP01112 189 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 IGLV2-14P01704 120 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 SMIM18P0DKX4 95 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 GP9P14770 177 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 CATR1Q13166 79 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 RPEL1Q2QD12 228 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 C10orf55Q5SWW7 151 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 TMEM17Q86X19 198 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 MFSD4AQ8N468 514 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 YIPF6Q96EC8 236 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 FYTTD1Q96QD9 318 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 OR2A7Q96R45 310 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 GPHA2Q96T91 129 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 ASCL2Q99929 193 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 CCL28Q9NRJ3 127 aa15.26■□□□□ 0.03
SHROOM1-204ENST00000440118 XRCC3O43542 346 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 BRI3O95415 125 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 PRH1P02810 166 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 RPS19P39019 145 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 RHOGP84095 191 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 EXOSC2Q13868 293 aaKnown RBP15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 TATDN3Q17R31 274 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 MRGPRG-AS1Q2M3A8 158 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 SSX9Q7RTT3 188 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 HAPLN4Q86UW8 402 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 SLC25A42Q86VD7 318 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 OR5AP2Q8NGF4 316 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 EHFQ9NZC4 300 aa15.25■□□□□ 0.03
SHROOM1-204ENST00000440118 CCDC160A6NGH7 325 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 FAM223BA6NKX1 122 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 ALDH3B2P48448 385 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 SYNJ2BPP57105 145 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 ATP5G2Q06055 141 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms