RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 SPATA46Q5T0L3 261 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 UNQ5815/PRO19632Q6UWF5 114 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 ZNF562Q6V9R5 426 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 NIT1Q86X76 327 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 MUC15Q8N387 334 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 TMEM251Q8N6I4 163 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 TMEM252Q8N6L7 170 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 UBALD1Q8TB05 177 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 TMEM190Q8WZ59 177 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 PAM16Q9Y3D7 125 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 MDC1Q14676 2089 aaKnown RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 TGIF2-C20orf24A0A0A6YYL0 155 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 IGHV3-64DA0A0J9YX35 117 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 MGST3O14880 152 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 BRI3O95415 125 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 MFAP4P55083 255 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 PSG5Q15238 335 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 MMDQ15546 238 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 CEACAM21Q3KPI0 293 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 C10orf113Q5VZT2 155 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 C12orf54Q6X4T0 127 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 TGIF2LYQ8IUE0 185 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 SLC22A18ASQ8N1D0 253 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 FLYWCH2Q96CP2 140 aaKnown RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 TMEM222Q9H0R3 208 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 SAP30LQ9HAJ7 183 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 ZNF207O43670 478 aaKnown RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BKO60814 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 AMBPP02760 352 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BJP06899 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 CD3EP07766 207 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BOP23527 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BBP33778 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BDP58876 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 RND3P61587 244 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BCP62807 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 P2RY6Q15077 328 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST2H2BEQ16778 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 ZNF880Q6PDB4 577 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 BPIFA4PQ86YQ2 179 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 SHISA5Q8N114 240 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BHQ93079 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 SIGMAR1Q99720 223 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BNQ99877 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HIST1H2BMQ99879 126 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 RTBDNQ9BSG5 229 aaPredicted RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 CCL28Q9NRJ3 127 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 CDH23Q9H251 3354 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 SRSF10O75494 262 aaKnown RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 TNFRSF6BO95407 300 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 APCSP02743 223 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 UMODP07911 640 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 HINT1P49773 126 aaPredicted RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 RPS20P60866 119 aaKnown RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 MEF2BQ02080 365 aaPredicted RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 SP7Q8TDD2 431 aaPredicted RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 DNASE2BQ8WZ79 361 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 LSM10Q969L4 123 aaKnown RBP5.47□□□□□ -1.53
BDNF-211ENST00000439476 RASL11BQ9BPW5 248 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 TMEM70Q9BUB7 260 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 UFC1Q9Y3C8 167 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 SCN8AQ9UQD0 1980 aa5.47□□□□□ -1.53
BDNF-211ENST00000439476 PRSS1P07477 247 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 ZNF83P51522 516 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 IZUMO4Q1ZYL8 232 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 PLPPR5Q32ZL2 321 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 C9orf50Q5SZB4 431 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 LINC01551Q86U37 167 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 OR8B3Q8NGG8 313 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 OR4P4Q8NGL7 312 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 ZDHHC16Q969W1 377 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 SPSB4Q96A44 273 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 OR8B2Q96RD0 313 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 TBX15Q96SF7 602 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 PMCHL2Q9BQD1 86 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 PSMG3Q9BT73 122 aaPredicted RBP5.46□□□□□ -1.53
BDNF-211ENST00000439476 ARRDC1-AS1Q9H2J1 176 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 TNFRSF18Q9Y5U5 241 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 RFNGQ9Y644 331 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 TRPM7Q96QT4 1865 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 PLXND1Q9Y4D7 1925 aa5.46□□□□□ -1.53
BDNF-211ENST00000439476 SPTBN5Q9NRC6 3674 aaKnown RBP5.46□□□□□ -1.54
BDNF-211ENST00000439476 IGKV1D-43A0A0B4J1Z2 117 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 TMEM250H0YL14 139 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 PAGE4O60829 102 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 IGHMP01871 453 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 IGHV4-34P06331 123 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 TRGC1P0CF51 173 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 FAM157CP0CG43 387 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 COLCA1Q6ZS62 124 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 TEX29Q8N6K0 151 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 FAM169BQ8N8A8 192 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 BMPERQ8N8U9 685 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 OR4D5Q8NGN0 318 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 RFESDQ8TAC1 157 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 FAM110AQ9BQ89 295 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 SCNM1Q9BWG6 230 aa5.46□□□□□ -1.54
BDNF-211ENST00000439476 MRPL13Q9BYD1 178 aaKnown RBP5.46□□□□□ -1.54
BDNF-211ENST00000439476 TUBA4BQ9H853 241 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms