RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ANKRD30BLA7E2S9 258 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 MMP23AO75900 390 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 PSG9Q00887 426 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 MUC21Q5SSG8 566 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 ABHD17BQ5VST6 288 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 WDR73Q6P4I2 378 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 DTX1Q86Y01 620 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 FADS6Q8N9I5 356 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 TAAR3PQ9P1P4 343 aa13.39□□□□□ -0.27
DHFR-201ENST00000439211 CNOT1A5YKK6 2376 aaKnown RBP13.39□□□□□ -0.27
DHFR-201ENST00000439211 HEATR1Q9H583 2144 aaKnown RBP13.38□□□□□ -0.27
DHFR-201ENST00000439211 IGHV1-45A0A0A0MS14 117 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 IGKV1-12A0A0C4DH73 117 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 SYNGR2O43760 224 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 TMEM50AO95807 157 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 IGKV1D-12P01611 117 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 NBEAP1P0C6P0 100 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 RBM11P57052 281 aaKnown RBP13.38□□□□□ -0.27
DHFR-201ENST00000439211 ARF6P62330 175 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 PRDX4Q13162 271 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 ZNF726P1Q15940 193 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 FER1L6-AS1Q8NA97 138 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 NANOS1Q8WY41 292 aaKnown RBP13.38□□□□□ -0.27
DHFR-201ENST00000439211 NABP1Q96AH0 204 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 GPR146Q96CH1 333 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 ZNF488Q96MN9 340 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 ZNF331Q9NQX6 463 aaPredicted RBP13.38□□□□□ -0.27
DHFR-201ENST00000439211 A0A0G2JMM0 328 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 A0A1W2PPB8 328 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 KIR3DP1A8MWS1 328 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 RPL15P61313 204 aaKnown RBP13.38□□□□□ -0.27
DHFR-201ENST00000439211 LRRC10Q5BKY1 277 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 SPINK14Q6IE38 97 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 TMEM54Q969K7 222 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 TMEM131Q92545 1883 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 KIR2DS1A0A191URI9 304 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 RFPL3SP0C7P2 107 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 KIR2DS4P43632 304 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 IL11RAQ14626 422 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 KIR2DS1Q14954 304 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 RPEL1Q2QD12 228 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 SLC25A34Q6PIV7 304 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 SELENOHQ8IZQ5 122 aaKnown RBP13.38□□□□□ -0.27
DHFR-201ENST00000439211 OR1B1Q8NGR6 318 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 PLPPR1Q8TBJ4 325 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 TAF15Q92804 592 aaKnown RBP eCLIP13.38□□□□□ -0.27
DHFR-201ENST00000439211 NAA38Q9BRA0 125 aaKnown RBP13.38□□□□□ -0.27
DHFR-201ENST00000439211 AGMATQ9BSE5 352 aa13.38□□□□□ -0.27
DHFR-201ENST00000439211 C22orf46C9J442 243 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 ZNF207O43670 478 aaKnown RBP13.37□□□□□ -0.27
DHFR-201ENST00000439211 NAPSAO96009 420 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 RSPO1Q2MKA7 263 aaPredicted RBP13.37□□□□□ -0.27
DHFR-201ENST00000439211 SF3B5Q9BWJ5 86 aaKnown RBP13.37□□□□□ -0.27
DHFR-201ENST00000439211 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 TRAV9-2A0A087WT02 112 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 TUSC2O75896 110 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 PPOXP50336 477 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 ZNF841Q6ZN19 808 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 LRTM2Q8N967 370 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 B4GALT7Q9UBV7 327 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 SRD5A2P31213 254 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 ZDHHC23Q8IYP9 409 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 ZIC4Q8N9L1 334 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 FGFBP3Q8TAT2 258 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 TMEM56Q96MV1 263 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 TMEM56-RWDD3S4R434 201 aa13.37□□□□□ -0.27
DHFR-201ENST00000439211 IGLV3-32A0A0A0MS00 114 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 PPIAL4DF5H284 164 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 ZNF324O75467 553 aaPredicted RBP13.36□□□□□ -0.27
DHFR-201ENST00000439211 C19orf35Q6ZS72 473 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 SYNGR3O43761 229 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 RPP25LQ8N5L8 163 aaKnown RBP13.36□□□□□ -0.27
DHFR-201ENST00000439211 APOBEC3DQ96AK3 386 aaPredicted RBP13.36□□□□□ -0.27
DHFR-201ENST00000439211 BOKQ9UMX3 212 aaPredicted RBP13.36□□□□□ -0.27
DHFR-201ENST00000439211 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 IGLC7A0M8Q6 106 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 SLC22A20A6NK97 555 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 J3QR89 54 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 COX6A1P12074 109 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 DEFA4P12838 97 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 RAB37Q96AX2 223 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 KCNS1Q96KK3 526 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 IL36RNQ9UBH0 155 aa13.36□□□□□ -0.27
DHFR-201ENST00000439211 IGHV2-26A0A0B4J1V2 119 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 ESDP10768 282 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 DCAF12Q5T6F0 453 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 PSMG3Q9BT73 122 aaPredicted RBP13.35□□□□□ -0.27
DHFR-201ENST00000439211 AKAP6Q13023 2319 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 FOXL1Q12952 345 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 ZNF324BQ6AW86 544 aaPredicted RBP13.35□□□□□ -0.27
DHFR-201ENST00000439211 TMEM211Q6ICI0 200 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 MRPL14Q6P1L8 145 aaKnown RBP13.35□□□□□ -0.27
DHFR-201ENST00000439211 SIGMAR1Q99720 223 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 ANAPC10Q9UM13 185 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 RNF115Q9Y4L5 304 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 SNAI2O43623 268 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 RBPJQ06330 500 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 SAP25Q8TEE9 199 aa13.35□□□□□ -0.27
DHFR-201ENST00000439211 C3orf80F5H4A9 247 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms