RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 OR9G1Q8NH87 305 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 TAF15Q92804 592 aaKnown RBP eCLIP10.39□□□□□ -0.75
TCOF1-205ENST00000439160 GALNT14Q96FL9 552 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 NAT8Q9UHE5 227 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 PXMP4Q9Y6I8 212 aa10.39□□□□□ -0.75
TCOF1-205ENST00000439160 IGHV1-18A0A0C4DH31 117 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 GOSR1O95249 250 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 IGHV3-48P01763 117 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 C10orf113Q5VZT2 155 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 FAM222BQ8WU58 562 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 SNRNP40Q96DI7 357 aaKnown RBP10.38□□□□□ -0.75
TCOF1-205ENST00000439160 MRPL37Q9BZE1 423 aaKnown RBP10.38□□□□□ -0.75
TCOF1-205ENST00000439160 MIOXQ9UGB7 285 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 NAT8BQ9UHF3 227 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 TCF19Q9Y242 345 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 TRAPPC1Q9Y5R8 145 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 IGKV1D-13A0A0B4J2D9 117 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 IGKV1-13P0DP09 117 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 HTR1DP28221 377 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 TCL1AP56279 114 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 CYB561D1Q8N8Q1 229 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 IL22RA2Q969J5 263 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 MARVELD3Q96A59 401 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 RALYQ9UKM9 306 aaKnown RBP10.38□□□□□ -0.75
TCOF1-205ENST00000439160 IGKV1-27A0A075B6S5 117 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 PLAUP00749 431 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 PNRC1Q12796 327 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-205ENST00000439160 ZNF880Q6PDB4 577 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 DHRS11Q6UWP2 260 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 CEACAM18A8MTB9 384 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 C17orf100A8MU93 164 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 S100A4P26447 101 aaKnown RBP10.38□□□□□ -0.75
TCOF1-205ENST00000439160 MIC13Q5XKP0 118 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 SSX7Q7RTT5 188 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 LDLRAD3Q86YD5 345 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 RNF24Q9Y225 148 aa10.38□□□□□ -0.75
TCOF1-205ENST00000439160 TRAV24A0A0B4J272 114 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 PTBP3O95758 552 aaKnown RBP10.37□□□□□ -0.75
TCOF1-205ENST00000439160 WDR82Q6UXN9 313 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 H1FOOQ8IZA3 346 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-205ENST00000439160 PNKDQ8N490 385 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 LSM10Q969L4 123 aaKnown RBP10.37□□□□□ -0.75
TCOF1-205ENST00000439160 TMPRSS5Q9H3S3 457 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 C17orf98A8MV24 154 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 UCP1P25874 307 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 CAMPP49913 170 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
TCOF1-205ENST00000439160 LRP11Q86VZ4 500 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 Q8WTZ3 238 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 RNF2Q99496 336 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 FAM90A26D6RGX4 464 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 GATCO43716 136 aaKnown RBP10.37□□□□□ -0.75
TCOF1-205ENST00000439160 ZNF735P0CB33 412 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 ATP5J2P56134 94 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 STARD4Q96DR4 205 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-205ENST00000439160 AP4M1O00189 453 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 KBTBD11O94819 623 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 RANP62826 216 aaKnown RBP10.37□□□□□ -0.75
TCOF1-205ENST00000439160 HIST3H3Q16695 136 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
TCOF1-205ENST00000439160 F8VVB4 439 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 F8VWA3 439 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 CXorf1O96002 111 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 REG1AP05451 166 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 BCL2P10415 239 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 CLEC5AQ9NY25 188 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 RAB5AP20339 215 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 KHDC3LQ587J8 217 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 SIGLECL1Q8N7X8 197 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 OR4C13Q8NGP0 309 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 LOC105371242A0A075B767 164 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 FCN1O00602 326 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 LIPFP07098 398 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 LINC00869P0C866 280 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 COX6B1P14854 86 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 RND2P52198 227 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 RTN4RL2Q86UN3 420 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 OR10G8Q8NGN5 311 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 TMEM18Q96B42 140 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
TCOF1-205ENST00000439160 HSBP1O75506 76 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 PRB3Q04118 309 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-205ENST00000439160 CLEC7AQ9BXN2 247 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 QTRT1Q9BXR0 403 aaKnown RBP10.35□□□□□ -0.75
TCOF1-205ENST00000439160 IGSF23A1L1A6 192 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 KIAA1324LA8MWY0 1029 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-205ENST00000439160 CCL3L1P16619 93 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 OR2T10Q8NGZ9 312 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 PERPQ96FX8 193 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 PLSCR4Q9NRQ2 329 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 LILRA1O75019 489 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 DHRS7BQ6IAN0 325 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-205ENST00000439160 FAM166AQ6J272 317 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 PROK2Q9HC23 129 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 TRBV6-7A0A0A0MS04 114 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 HELTA6NFD8 242 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 LYNX1G3V0Z9 82 aa10.35□□□□□ -0.75
TCOF1-205ENST00000439160 LYNX1P0DP58 116 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms