RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 PRSS8Q16651 343 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 C10orf55Q5SWW7 151 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 KPRPQ5T749 579 aaPredicted RBP10.31□□□□□ -0.76
LINC00399-201ENST00000439008 UNQ5815/PRO19632Q6UWF5 114 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 ZNF66Q6ZN08 573 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 TEX45Q8NA69 505 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 OR5H2Q8NGV7 314 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 OSR1Q8TAX0 266 aaPredicted RBP10.31□□□□□ -0.76
LINC00399-201ENST00000439008 AP3S1Q92572 193 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 ARPC1AQ92747 370 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 MOB3AQ96BX8 217 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 HSD17B10Q99714 261 aaKnown RBP10.31□□□□□ -0.76
LINC00399-201ENST00000439008 BCL7BQ9BQE9 202 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 ALX4Q9H161 411 aaPredicted RBP10.31□□□□□ -0.76
LINC00399-201ENST00000439008 ZNF430Q9H8G1 570 aaPredicted RBP10.31□□□□□ -0.76
LINC00399-201ENST00000439008 SCPEP1Q9HB40 452 aa10.31□□□□□ -0.76
LINC00399-201ENST00000439008 CCDC59Q9P031 241 aaKnown RBP10.31□□□□□ -0.76
LINC00399-201ENST00000439008 FOXA2Q9Y261 457 aaPredicted RBP10.31□□□□□ -0.76
LINC00399-201ENST00000439008 A0A1B0GW64 132 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 E7EUB6 86 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 I3L521 148 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 M0QYG6 137 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 SULT1C2O00338 296 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 PF4P02776 101 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 APELAP0DMC3 54 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 TAS2R46P59540 309 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 MSMO1Q15800 293 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 AKIRIN2Q53H80 203 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 ABHD5Q8WTS1 349 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 OR5B12Q96R08 314 aa10.3□□□□□ -0.76
LINC00399-201ENST00000439008 TINAGL1Q9GZM7 467 aaPredicted RBP10.3□□□□□ -0.76
LINC00399-201ENST00000439008 CCL24O00175 119 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 RGS5O15539 181 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 MYOD1P15172 320 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 CD33P20138 364 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 RCVRNP35243 200 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 MYCNOSP40205 109 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 DEFA5Q01523 94 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 ACTBL2Q562R1 376 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 AADACL3Q5VUY0 350 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 PUSL1Q8N0Z8 303 aaKnown RBP10.29□□□□□ -0.76
LINC00399-201ENST00000439008 OR5T1Q8NG75 326 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 OR4D10Q8NGI6 311 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 OR51H1Q8NH63 302 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 C4orf3Q8WVX3 66 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 MS4A10Q96PG2 267 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 NXF2Q9GZY0 626 aaKnown RBP10.29□□□□□ -0.76
LINC00399-201ENST00000439008 MTFP1Q9UDX5 166 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 SCOCQ9UIL1 159 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 PRELID3BQ9Y3B1 194 aa10.29□□□□□ -0.76
LINC00399-201ENST00000439008 TRAV3A0A0B4J244 114 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 MSGN1A6NI15 193 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 PGLYRP1O75594 196 aaPredicted RBP10.28□□□□□ -0.76
LINC00399-201ENST00000439008 CNIH1O95406 144 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 CD3DP04234 171 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 HERV-K104P61576 105 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 CBX3Q13185 183 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 FHL3Q13643 280 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 TNXAQ16473 311 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 VMA21Q3ZAQ7 101 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 SSX9Q7RTT3 188 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 SPAG16Q8N0X2 631 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 ZBTB34Q8NCN2 500 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 OR4S2Q8NH73 311 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 RHOVQ96L33 236 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 UBE2E2Q96LR5 201 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 SOSTQ9BQB4 213 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 DCUN1D5Q9BTE7 237 aa10.28□□□□□ -0.76
LINC00399-201ENST00000439008 CGB1A6NKQ9 187 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 S1PR2O95136 353 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 RLN1P04808 185 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 IL6RP08887 468 aaPredicted RBP10.27□□□□□ -0.77
LINC00399-201ENST00000439008 SLC6A1P30531 599 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 KRTAP10-11P60412 298 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 RUNX1Q01196 453 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 TMEM267Q0VDI3 215 aaPredicted RBP10.27□□□□□ -0.77
LINC00399-201ENST00000439008 ZNF585BQ52M93 769 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 VAX1Q5SQQ9 334 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 FOXB2Q5VYV0 432 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 TMEM65Q6PI78 240 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 C19orf35Q6ZS72 473 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 OR6F1Q8NGZ6 308 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 SRSF12Q8WXF0 261 aaKnown RBP10.27□□□□□ -0.77
LINC00399-201ENST00000439008 MRGPRFQ96AM1 343 aa10.27□□□□□ -0.77
LINC00399-201ENST00000439008 HMX3A6NHT5 357 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 TEX22C9J3V5 150 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 TPPPO94811 219 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 KBTBD11O94819 623 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 IGHV3-11P01762 117 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 ZNF735P0CB33 412 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 RPA2P15927 270 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 TNFSF8P32971 234 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 PHLDA2Q53GA4 152 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 PDLIM3Q53GG5 364 aaPredicted RBP10.26□□□□□ -0.77
LINC00399-201ENST00000439008 FAAP20Q6NZ36 180 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 LHFPL1Q86WI0 220 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 TCTEX1D1Q8N7M0 179 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 ADAD2Q8NCV1 583 aaKnown RBP10.26□□□□□ -0.77
LINC00399-201ENST00000439008 OR11H1Q8NG94 326 aa10.26□□□□□ -0.77
LINC00399-201ENST00000439008 OR5M8Q8NGP6 311 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms