RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 DRAM1Q8N682 238 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 MS4A10Q96PG2 267 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 DOK5Q9P104 306 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 CEP192Q8TEP8 1941 aa9.77□□□□□ -0.85
TRAPPC9-202ENST00000438773 PROB1E7EW31 1015 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 IFNL4K9M1U5 179 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 GALR1P47211 349 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 TMEM56Q96MV1 263 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 ELOVL1Q9BW60 279 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 SPRY4Q9C004 299 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 PLA2G2EQ9NZK7 142 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 OR5G3P0C626 314 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 SLC35B1P78383 322 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZCCHC24Q8N2G6 241 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZNF645Q8N7E2 425 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 DCTN5Q9BTE1 182 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 TRAPPC1Q9Y5R8 145 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 KIAA1324LA8MWY0 1029 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZNF737O75373 536 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 SUPT4H1P63272 117 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 PLPPR1Q8TBJ4 325 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 MRPL30Q8TCC3 161 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 GPR146Q96CH1 333 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 GALNT14Q96FL9 552 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 HARBI1Q96MB7 349 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZNF714Q96N38 554 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 PAM16Q9Y3D7 125 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 TRAV24A0A0B4J272 114 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 HSBP1L1C9JCN9 74 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 THBS3P49746 956 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 FFAR4Q5NUL3 377 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 SELENOHQ8IZQ5 122 aaKnown RBP9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 MUC15Q8N387 334 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 GCSAMQ8N6F7 178 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 ATP5SQ99766 215 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 CTDSP1Q9GZU7 261 aa9.76□□□□□ -0.85
TRAPPC9-202ENST00000438773 PTPN13Q12923 2485 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 MBD3L4A6NDZ8 208 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 MBD3L3A6NE82 208 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 MBD3L5A6NJ08 208 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 K7N7A8 449 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 TFF1P04155 84 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 VAMP3Q15836 100 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 TMEM241Q24JQ0 296 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 LYPD6Q86Y78 171 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 DOLPP1Q86YN1 238 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 MBD3L2Q8NHZ7 208 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 VPS25Q9BRG1 176 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 ZNF581Q9P0T4 197 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 SEC14L6B5MCN3 397 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 EGR1P18146 543 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 WDR82Q6UXN9 313 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 TMEM147Q9BVK8 224 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 MRPL37Q9BZE1 423 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 PLSCR2Q9NRY7 297 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 F6UZH7 168 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 SIGLECL1Q8N7X8 197 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 ATG101Q9BSB4 218 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 FKBP11Q9NYL4 201 aa9.75□□□□□ -0.85
TRAPPC9-202ENST00000438773 NCBP2LA6PVI3 153 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 OR13A1Q8NGR1 328 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 VSTM2AQ8TAG5 236 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 AQP10Q96PS8 301 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 INSIG2Q9Y5U4 225 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 TLN1Q9Y490 2541 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 FAM3BP58499 235 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 COLCA1Q6ZS62 124 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 S100A7AQ86SG5 101 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 LINC00469Q8N7U9 141 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 FLYWCH2Q96CP2 140 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 SLC25A15Q9Y619 301 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 TRBV6-7A0A0A0MS04 114 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 IGKV1D-13A0A0B4J2D9 117 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 HPRT1P00492 218 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 IGKV1-13P0DP09 117 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 HKR1P10072 659 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 SRP14P37108 136 aaKnown RBP9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 ATP6V1FQ16864 119 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 BSXQ3C1V8 233 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 FAM216BQ8N7L0 139 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 CEP295Q9C0D2 2601 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 SPTBN4Q9H254 2564 aa9.74□□□□□ -0.85
TRAPPC9-202ENST00000438773 CT45A6P0DMU7 189 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 CT45A5P0DMU8 189 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 CT45A7P0DMV0 189 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 APOBEC3AP31941 199 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 SULT1A2P50226 295 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 ERVFC1-1P60608 527 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 GAMTQ14353 236 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 CT45A1Q5HYN5 189 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 RPRMLQ8N4K4 120 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 CT45A3Q8NHU0 189 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 DAZAP1Q96EP5 407 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 JPT1Q9UK76 154 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 IGHV1-69-2A0A0G2JMI3 117 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 K7ENP7 123 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 PTBP3O95758 552 aaKnown RBP9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
TRAPPC9-202ENST00000438773 CEACAM3P40198 252 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms