RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PFDN6O15212 129 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 HSBP1O75506 76 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 CNIH1O95406 144 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 IGHV1-46P01743 117 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 STAG3L3P0CL85 134 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 CD79AP11912 226 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 PRKACBP22694 351 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 RAP1GDS1P52306 607 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 PSMD4P55036 377 aaKnown RBP1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 CMC4P56277 68 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 ATP6V0D1P61421 351 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 DYNLT1P63172 113 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 PSPHP78330 225 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 TNFAIP6P98066 277 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 IFITM3Q01628 133 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 NAB1Q13506 487 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 PDK2Q15119 407 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 KLHL12Q53G59 568 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 PRR9Q5T870 116 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 C1orf134Q5TEV5 83 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 RESP18Q5W5W9 173 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 PLCXD3Q63HM9 321 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 TTC19Q6DKK2 380 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 OR2T5Q6IEZ7 315 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 PPP1R2P3Q6NXS1 205 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 WDR82Q6UXN9 313 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 TMPPEQ6ZT21 453 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 AAED1Q7RTV5 226 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 FAM122BQ7Z309 247 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 OR2W3Q7Z3T1 314 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 SPATA12Q7Z6I5 190 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 APRG1Q8IVJ8 170 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 OR2T29Q8NH02 315 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 GPX8Q8TED1 209 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 DCAKDQ8WVC6 231 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 RORBQ92753 470 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 ISOC2Q96AB3 205 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 KCNS1Q96KK3 526 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 GPR82Q96P67 336 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 OPALINQ96PE5 141 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 VAT1Q99536 393 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 FRMD8P1Q9BZ68 369 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 SLC19A3Q9BZV2 496 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 DDX18Q9NVP1 670 aaKnown RBP1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 ADA2Q9NZK5 511 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 LRRC42Q9Y546 428 aa1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 APOBP04114 4563 aaKnown RBP1.72□□□□□ -2.13
HMGB3P12-201ENST00000438745 IGHV1-3A0A0C4DH29 117 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 IGLL5B9A064 214 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 TAAR5O14804 337 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 FADS1O60427 444 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 GATBO75879 557 aaKnown RBP1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 SMC2O95347 1197 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 FARS2O95363 451 aaKnown RBP1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 YEATS4O95619 227 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 RAB36O95755 333 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 PTTG1O95997 202 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 MPC1LP0DKB6 136 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 UCHL3P15374 230 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 RPS3P23396 243 aaKnown RBP eCLIP1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 APLNRP35414 380 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 RGS6P49758 472 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 XKP51811 444 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 UBE2E1P51965 193 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 TCTAP57738 103 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 RBX1P62877 108 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 BLCAPP62952 87 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 PAFAH1B2P68402 229 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 PRB3Q04118 309 aaPredicted RBP1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 FUT5Q11128 374 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 KLRD1Q13241 179 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 DEFB136Q30KP8 78 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 LGALS9BQ3B8N2 356 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 C6orf99Q4VX62 202 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 C10orf99Q6UWK7 81 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 TMPRSS11AQ6ZMR5 421 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 SLC30A8Q8IWU4 369 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 ZNF567Q8N184 647 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 ZNF283Q8N7M2 679 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 DEFB104AQ8WTQ1 72 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 NELFBQ8WX92 580 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 PEX13Q92968 403 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 RCN3Q96D15 328 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 CERS2Q96G23 380 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 PPP1R2P1Q96PQ5 205 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 TOLLIPQ9H0E2 274 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 HEATR1Q9H583 2144 aaKnown RBP1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 CHRAC1Q9NRG0 131 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 TMEM100Q9NV29 134 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 TAS2R5Q9NYW4 299 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 RHBDD3Q9Y3P4 386 aa1.71□□□□□ -2.14
HMGB3P12-201ENST00000438745 IGLV3-9A0A075B6K5 115 aa1.7□□□□□ -2.14
HMGB3P12-201ENST00000438745 IGLV3-32A0A0A0MS00 114 aa1.7□□□□□ -2.14
HMGB3P12-201ENST00000438745 A0A0A6YYD5 115 aa1.7□□□□□ -2.14
HMGB3P12-201ENST00000438745 ZNF98A6NK75 572 aa1.7□□□□□ -2.14
HMGB3P12-201ENST00000438745 TGOLN2O43493 480 aa1.7□□□□□ -2.14
HMGB3P12-201ENST00000438745 TRBV12-3P01733 135 aa1.7□□□□□ -2.14
HMGB3P12-201ENST00000438745 C8GP07360 202 aa1.7□□□□□ -2.14
HMGB3P12-201ENST00000438745 RNASE2P10153 161 aaKnown RBP1.7□□□□□ -2.14
HMGB3P12-201ENST00000438745 ZNF35P13682 527 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms