RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FHL3Q13643 280 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 PRSS8Q16651 343 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 OR2B11Q5JQS5 317 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 OR5H2Q8NGV7 314 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 CCL28Q9NRJ3 127 aa19.23■□□□□ 0.67
RAPGEF1-206ENST00000438647 H3BUA1 57 aa19.22■□□□□ 0.67
RAPGEF1-206ENST00000438647 ACTL6BO94805 426 aa19.22■□□□□ 0.67
RAPGEF1-206ENST00000438647 PRB2P02812 416 aaPredicted RBP19.22■□□□□ 0.67
RAPGEF1-206ENST00000438647 OR8U8P0C7N1 319 aa19.22■□□□□ 0.67
RAPGEF1-206ENST00000438647 ELK1P19419 428 aa19.22■□□□□ 0.67
RAPGEF1-206ENST00000438647 DYRK1AQ13627 763 aa19.22■□□□□ 0.67
RAPGEF1-206ENST00000438647 IDO2Q6ZQW0 420 aa19.22■□□□□ 0.67
RAPGEF1-206ENST00000438647 VSTM2AQ8TAG5 236 aa19.22■□□□□ 0.67
RAPGEF1-206ENST00000438647 FAM25AB3EWG3 89 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 FAM25CB3EWG5 89 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 FAM25GB3EWG6 89 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 SAA1P0DJI8 122 aaPredicted RBP19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 TPPP2P59282 170 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 ZNF616Q08AN1 781 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 CATR1Q13166 79 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 TNXAQ16473 311 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 TMEM17Q86X19 198 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 POC5Q8NA72 575 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 OR1N2Q8NGR9 330 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 GPX8Q8TED1 209 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 CASTOR1Q8WTX7 329 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 OR5B12Q96R08 314 aa19.21■□□□□ 0.67
RAPGEF1-206ENST00000438647 SULT1C2O00338 296 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 TNFSF12O43508 249 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 RFX2P48378 723 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 DHRS11Q6UWP2 260 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 SNX29P2Q8IUI4 249 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 MMD2Q8IY49 270 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 MS4A10Q96PG2 267 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 PHB2Q99623 299 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 ZNF355PQ9NSJ1 428 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 AURKAIP1Q9NWT8 199 aaPredicted RBP19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 ZMAT5Q9UDW3 170 aaKnown RBP19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 ADAM30Q9UKF2 790 aa19.2■□□□□ 0.66
RAPGEF1-206ENST00000438647 PMP2P02689 132 aa19.19■□□□□ 0.66
RAPGEF1-206ENST00000438647 TRGV3P03979 118 aa19.19■□□□□ 0.66
RAPGEF1-206ENST00000438647 LGALS1P09382 135 aaKnown RBP19.19■□□□□ 0.66
RAPGEF1-206ENST00000438647 RAB2BQ8WUD1 216 aa19.19■□□□□ 0.66
RAPGEF1-206ENST00000438647 AIFM2Q9BRQ8 373 aa19.19■□□□□ 0.66
RAPGEF1-206ENST00000438647 ZNF2Q9BSG1 426 aaPredicted RBP19.19■□□□□ 0.66
RAPGEF1-206ENST00000438647 ZNF430Q9H8G1 570 aaPredicted RBP19.19■□□□□ 0.66
RAPGEF1-206ENST00000438647 RBFOX2O43251 390 aaKnown RBP eCLIP19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 HRASP01112 189 aa19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 EGFEM1PQ0D2K5 195 aa19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 MRGPRG-AS1Q2M3A8 158 aa19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 CLVS1Q8IUQ0 354 aaPredicted RBP19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 OR5T1Q8NG75 326 aa19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 OR6F1Q8NGZ6 308 aa19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 SRSF12Q8WXF0 261 aaKnown RBP19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 MOB3AQ96BX8 217 aa19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 BCL7BQ9BQE9 202 aa19.18■□□□□ 0.66
RAPGEF1-206ENST00000438647 MSGN1A6NI15 193 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 MPPED1O15442 326 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 OR2A4O95047 310 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 BRI3O95415 125 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 HLA-DMAP28067 261 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 RCVRNP35243 200 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 HRH1P35367 487 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 ZNF818PQ6ZRF7 136 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 SPAG16Q8N0X2 631 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 MRAPQ8TCY5 172 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 RHOVQ96L33 236 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 OR2A7Q96R45 310 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 GPHA2Q96T91 129 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 SPIN2AQ99865 258 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 SPIN2BQ9BPZ2 258 aa19.17■□□□□ 0.66
RAPGEF1-206ENST00000438647 TNCP24821 2201 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 A0A0G2JLM5 398 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 TPPPO94811 219 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 HOXD3P31249 432 aaPredicted RBP19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 BRWD1-AS2P59051 145 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 C9orf66Q5T8R8 295 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 ASPHD1Q5U4P2 390 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 VKORC1L1Q8N0U8 176 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 CD300LFQ8TDQ1 290 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 C15orf40Q8WUR7 153 aa19.16■□□□□ 0.66
RAPGEF1-206ENST00000438647 LINC01619G3V211 115 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 KBTBD11O94819 623 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 GNRHRP30968 328 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 RPL5P46777 297 aaKnown RBP19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 TMBIM6P55061 237 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 TSPAN5P62079 268 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 AADACL3Q5VUY0 350 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 LYSMD2Q8IV50 215 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 CMTM1Q8IZ96 169 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 ALX4Q9H161 411 aaPredicted RBP19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 COA4Q9NYJ1 87 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 EXTL2Q9UBQ6 330 aa19.15■□□□□ 0.66
RAPGEF1-206ENST00000438647 C13orf42A0A1B0GVH6 325 aa19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 SEC14L6B5MCN3 397 aa19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 RAMP3O60896 148 aa19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 NOL3O60936 208 aaKnown RBP19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 IGHV3-11P01762 117 aa19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 MAS1LP35410 378 aa19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 SPCS2Q15005 226 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms