RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 XIRP1Q702N8 1843 aaKnown RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 SMIM26A0A096LP01 95 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 FAM236DA0A1B0GTK5 79 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 A0A1W2PP18 115 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM218A2RU14 115 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 PGPA6NDG6 321 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 FAM183AA6NL82 134 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 CD300LBA8K4G0 201 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 BTNL10A8MVZ5 291 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 INMT-MINDY4F8WBC2 141 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 K7EQS6 105 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 RBFOX2O43251 390 aaKnown RBP eCLIP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 PIAS1O75925 651 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 YIF1AO95070 293 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 GABARAPO95166 117 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 CDRT1O95170 752 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 OPN1SWP03999 348 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 OR5G3P0C626 314 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 CISD3P0C7P0 127 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 FAM236CP0DP71 79 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 SPNP16150 400 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 RPL7P18124 248 aaKnown RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ORM2P19652 201 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 CXCL3P19876 107 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 RPS3P23396 243 aaKnown RBP eCLIP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 PRTN3P24158 256 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 NPY1RP25929 384 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 CMPK1P30085 196 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 TSPOP30536 169 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 AGTR1P30556 359 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 PRSS3P35030 304 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 GABRA2P47869 451 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 NDUFA8P51970 172 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF138P52744 262 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 EMP1P54849 157 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 NCS1P62166 190 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 GNG5P63218 68 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 MEF2CQ06413 473 aaPredicted RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ERCC8Q13216 396 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 PAFAH1B3Q15102 231 aaKnown RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 RGNQ15493 299 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 BATFQ16520 125 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 CEACAM16Q2WEN9 425 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 CCSMST1Q4G0I0 132 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 MORN2Q502X0 79 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 DGAT2L6Q6ZPD8 337 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 GOLT1AQ6ZVE7 132 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 NEGR1Q7Z3B1 354 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 SLC35G3Q8N808 338 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 OR4M1Q8NGD0 313 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 OR13C8Q8NGS7 320 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF418Q8TF45 676 aaPredicted RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 THEM6Q8WUY1 208 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 OR5P3Q8WZ94 311 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 SLC7A6Q92536 515 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 RBPMSQ93062 196 aaKnown RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 BORCS7Q96B45 105 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ISOC1Q96CN7 298 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 FAM19A4Q96LR4 140 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 CNBD2Q96M20 576 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 IP6K3Q96PC2 410 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 OR2A5Q96R48 311 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 LXNQ9BS40 222 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 PSMG3Q9BT73 122 aaPredicted RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 SLC25A31Q9H0C2 315 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 SH3BGRL3Q9H299 93 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 RPP21Q9H633 154 aaKnown RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 EFCAB1Q9HAE3 211 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 TAF9BQ9HBM6 251 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 GPR84Q9NQS5 396 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ACER3Q9NUN7 267 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 RBFOX1Q9NWB1 397 aaKnown RBP2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 TAS2R5Q9NYW4 299 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 SIGLEC7Q9Y286 467 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 LAMTOR2Q9Y2Q5 125 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ENPP4Q9Y6X5 453 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 REREQ9P2R6 1566 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 MYH11P35749 1972 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 ARHGEF11O15085 1522 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 SLIT3O75094 1523 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 LRP4O75096 1905 aa2.27□□□□□ -2.05
LSM1P1-201ENST00000438629 BRCA1P38398 1863 aaKnown RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 ADAMTSL1Q8N6G6 1762 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 SIGLEC1Q9BZZ2 1709 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 LOC102724200A0A096LPH7 203 aaPredicted RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 IGHV3-74A0A0B4J1X5 117 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TRAV38-1A0A0B4J264 116 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TEX50A0A1B0GTY4 177 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 RBFOX3A6NFN3 312 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 C1orf196B1AJZ1 125 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 EEF1E1-BLOC1S5C9J1V9 151 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 D6RAR5 112 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 K7EPK0 472 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 EEF1E1O43324 174 aaKnown RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 IGKV1D-16P01601 117 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TRBV12-3P01733 135 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 HBZP02008 142 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TTRP02766 147 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 CSN2P05814 226 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 IL3P08700 152 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms