RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 C15orf32Q32M92 178 aa13.01□□□□□ -0.33
PTCH2-202ENST00000438067 C10orf55Q5SWW7 151 aa13.01□□□□□ -0.33
PTCH2-202ENST00000438067 MAFIPQ8WZ33 124 aa13.01□□□□□ -0.33
PTCH2-202ENST00000438067 GINS4Q9BRT9 223 aa13.01□□□□□ -0.33
PTCH2-202ENST00000438067 RAB22AQ9UL26 194 aa13.01□□□□□ -0.33
PTCH2-202ENST00000438067 TMEM272A0A1B0GTI8 110 aa13□□□□□ -0.33
PTCH2-202ENST00000438067 LGALS9O00182 355 aa13□□□□□ -0.33
PTCH2-202ENST00000438067 GGCTO75223 188 aaKnown RBP13□□□□□ -0.33
PTCH2-202ENST00000438067 SAA1P0DJI8 122 aaPredicted RBP13□□□□□ -0.33
PTCH2-202ENST00000438067 RPS25P62851 125 aaKnown RBP13□□□□□ -0.33
PTCH2-202ENST00000438067 IRF3Q14653 427 aa13□□□□□ -0.33
PTCH2-202ENST00000438067 CDK10Q15131 360 aa13□□□□□ -0.33
PTCH2-202ENST00000438067 FAM209BQ5JX69 171 aa13□□□□□ -0.33
PTCH2-202ENST00000438067 LINC00476Q8WZB0 136 aa13□□□□□ -0.33
PTCH2-202ENST00000438067 V9GY05 133 aa13□□□□□ -0.33
PTCH2-202ENST00000438067 CREBL2O60519 120 aaPredicted RBP12.99□□□□□ -0.33
PTCH2-202ENST00000438067 GNB3P16520 340 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 CBLN1P23435 193 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 CALRP27797 417 aaKnown RBP12.99□□□□□ -0.33
PTCH2-202ENST00000438067 RANBP1P43487 201 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 SLC16A13Q7RTY0 426 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 SLC25A42Q86VD7 318 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 GPHB5Q86YW7 130 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 MMD2Q8IY49 270 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 H1FOOQ8IZA3 346 aaPredicted RBP12.99□□□□□ -0.33
PTCH2-202ENST00000438067 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
PTCH2-202ENST00000438067 HMX3A6NHT5 357 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 HSMCR30P0CW71 290 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 PSMD7P51665 324 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 RCN1Q15293 331 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 TRAM1Q15629 374 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 HES5Q5TA89 166 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 OGFRL1Q5TC84 451 aaPredicted RBP12.98□□□□□ -0.33
PTCH2-202ENST00000438067 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 OR10R2Q8NGX6 335 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 CACNG8Q8WXS5 425 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 DCUN1D5Q9BTE7 237 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 KRTAP17-1Q9BYP8 105 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 FBXL7Q9UJT9 491 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 ZNF257Q9Y2Q1 563 aa12.98□□□□□ -0.33
PTCH2-202ENST00000438067 RAB27BO00194 218 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 EBAG9O00559 213 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 MFNGO00587 321 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 FCGR3BO75015 233 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 LY6G6CO95867 125 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 PSMA1P25786 263 aaKnown RBP12.97□□□□□ -0.33
PTCH2-202ENST00000438067 Q6ZS49 121 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 C19orf35Q6ZS72 473 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 CENPOQ9BU64 300 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 GGTLC1Q9BX51 225 aa12.97□□□□□ -0.33
PTCH2-202ENST00000438067 A0A075B6Q4 140 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 IGKV1D-8A0A087WSZ0 117 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 TEX22C9J3V5 150 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 J3QRK9 145 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 IGHV3-23P01764 117 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 IL6RP08887 468 aaPredicted RBP12.96□□□□□ -0.33
PTCH2-202ENST00000438067 HIST1H1DP16402 221 aaKnown RBP12.96□□□□□ -0.33
PTCH2-202ENST00000438067 GADD45AP24522 165 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 FABP5Q01469 135 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 ZNF57Q68EA5 555 aaPredicted RBP12.96□□□□□ -0.33
PTCH2-202ENST00000438067 VKORC1L1Q8N0U8 176 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 OR52B4Q8NGK2 314 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 ST6GALNAC5Q9BVH7 336 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 OR51E2Q9H255 320 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 MLXQ9UH92 298 aa12.96□□□□□ -0.33
PTCH2-202ENST00000438067 LOC102724200A0A096LPH7 203 aaPredicted RBP12.95□□□□□ -0.34
PTCH2-202ENST00000438067 ZNF320A2RRD8 509 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 NPIPB5A8MRT5 1133 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 E7EUB6 86 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 CASQ2O14958 399 aaPredicted RBP12.95□□□□□ -0.34
PTCH2-202ENST00000438067 NDUFB8O95169 186 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 ARL3P36405 182 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 TALDO1P37837 337 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 RPL30P62888 115 aaKnown RBP12.95□□□□□ -0.34
PTCH2-202ENST00000438067 ARFRP1Q13795 201 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 FAM106AQ4KMX7 169 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 CLEC19AQ6UXS0 136 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 ZNF645Q8N7E2 425 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 UXS1Q8NBZ7 420 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 CCDC140Q96MF4 163 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 SLC2A9Q9NRM0 540 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 PRELID3BQ9Y3B1 194 aa12.95□□□□□ -0.34
PTCH2-202ENST00000438067 DPPA5A6NC42 116 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 CXorf65A6NEN9 183 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 ERICH4A6NGS2 130 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 SCAF4O95104 1147 aaKnown RBP12.94□□□□□ -0.34
PTCH2-202ENST00000438067 MLLT11Q13015 90 aaPredicted RBP12.94□□□□□ -0.34
PTCH2-202ENST00000438067 ANKRD55Q3KP44 614 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 OR2B11Q5JQS5 317 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 KCTD9Q7L273 389 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
PTCH2-202ENST00000438067 DUSP21Q9H596 190 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 ACOT13Q9NPJ3 140 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 MRPS7Q9Y2R9 242 aaKnown RBP12.94□□□□□ -0.34
PTCH2-202ENST00000438067 S4R3C0 116 aa12.94□□□□□ -0.34
PTCH2-202ENST00000438067 A0A1B0GW64 132 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms