RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 MDKP21741 143 aaPredicted RBP7.88□□□□□ -1.15
CUX1-206ENST00000437600 TAS2R30P59541 319 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 LINC00596Q86U02 117 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 GATAD1Q8WUU5 269 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 CXXC4Q9H2H0 198 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 PRO1933Q9H354 126 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 GNG12Q9UBI6 72 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 WIPI2Q9Y4P8 454 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 TRGV8A0A0C4DH27 118 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 IFITM10A6NMD0 228 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 IFNA17P01571 189 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 IGKV1D-33P01593 117 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 IGKV1-33P01594 117 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 OPN1MWP04001 364 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 OPN1MW2P0DN77 364 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 OPN1MW3P0DN78 364 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 RPS10P46783 165 aaKnown RBP7.87□□□□□ -1.15
CUX1-206ENST00000437600 HMGN3Q15651 99 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 KRTCAP3Q53RY4 240 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 PDZD11Q5EBL8 140 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 Q8IYB0 196 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 PBDC1Q9BVG4 233 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 STRAPQ9Y3F4 350 aaKnown RBP7.87□□□□□ -1.15
CUX1-206ENST00000437600 TENM4Q6N022 2769 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 FCGR3BO75015 233 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 TIMP3P35625 211 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 TAGLN2P37802 199 aaKnown RBP7.87□□□□□ -1.15
CUX1-206ENST00000437600 KLRB1Q12918 225 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 ICAM4Q14773 271 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 ZNF525Q8N782 197 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 OR10D4PQ8NGN7 298 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 RAB39BQ96DA2 213 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 GAR1Q9NY12 217 aaKnown RBP7.87□□□□□ -1.15
CUX1-206ENST00000437600 NBPF19A0A087WUL8 3843 aa7.87□□□□□ -1.15
CUX1-206ENST00000437600 TRAV3A0A0B4J244 114 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 GCSAMLQ5JQS6 135 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 TIMM23BQ5SRD1 257 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 ETFRF1Q6IPR1 90 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 ZNF429Q86V71 674 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 GCSAMQ8N6F7 178 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 RAB40CQ96S21 281 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 PRDM13Q9H4Q3 707 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 HCFC1P51610 2035 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 SCAF4O95104 1147 aaKnown RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 CYB5R3P00387 301 aaPredicted RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 SRP19P09132 144 aaKnown RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 MYOD1P15172 320 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 HOXA5P20719 270 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 LMO1P25800 156 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 CEACAM8P31997 349 aaPredicted RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 MDH2P40926 338 aaKnown RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 CCL8P80075 99 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 DLK1P80370 383 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 TNFRSF9Q07011 255 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 ZNF674Q2M3X9 581 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 C1orf122Q6ZSJ8 110 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 ZNF645Q8N7E2 425 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 OR5T1Q8NG75 326 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 ITLN1Q8WWA0 313 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 AGMATQ9BSE5 352 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 HES4Q9HCC6 221 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 LIN7CQ9NUP9 197 aaKnown RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 AURKAIP1Q9NWT8 199 aaPredicted RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 BTBD17A6NE02 478 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 OOEPA6NGQ2 149 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 CEBPZOSA8MTT3 80 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 OR2C1O95371 312 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 CDX1P47902 265 aaPredicted RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 RPS23P62266 143 aaKnown RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 GAMTQ14353 236 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 RPP25LQ8N5L8 163 aaKnown RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 CLDND2Q8NHS1 167 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 GNPNAT1Q96EK6 184 aaPredicted RBP7.86□□□□□ -1.15
CUX1-206ENST00000437600 SFXN3Q9BWM7 321 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 SLC25A22Q9H936 323 aa7.86□□□□□ -1.15
CUX1-206ENST00000437600 MMP9P14780 707 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 UQCRFS1P47985 274 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 PRB3Q04118 309 aaPredicted RBP7.85□□□□□ -1.15
CUX1-206ENST00000437600 TFF3Q07654 80 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 SLC38A11Q08AI6 406 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 H2BFWTQ7Z2G1 175 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 REC114Q7Z4M0 266 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 RCC1LQ96I51 464 aaKnown RBP7.85□□□□□ -1.15
CUX1-206ENST00000437600 MRPL37Q9BZE1 423 aaKnown RBP7.85□□□□□ -1.15
CUX1-206ENST00000437600 TUBA4BQ9H853 241 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 SPG11Q96JI7 2443 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 A0A087X0M5 115 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 A0A1B0GX30 115 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 TMEM210A6NLX4 147 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 LRRC30A6NM36 301 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 J3QW42 95 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 OR9G9P0C7N8 305 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 DDTP30046 118 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 TLE4Q04727 773 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 BAXQ07812 192 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 CDSNQ15517 529 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 ABHD12Q8N2K0 398 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 IL22RA2Q969J5 263 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms