RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
SGCE-205ENST00000437425 FKBP11Q9NYL4 201 aa12.57□□□□□ -0.4
SGCE-205ENST00000437425 AMMECR1Q9Y4X0 333 aaPredicted RBP12.57□□□□□ -0.4
SGCE-205ENST00000437425 USF3Q68DE3 2245 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 CEBPZOSA8MTT3 80 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 CST7O76096 145 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 IAPPP10997 89 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 LINC00205P59089 165 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 UQCC3Q6UW78 93 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 TMEM14EPQ6UXP3 125 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 ZNF295-AS1Q8N0V1 137 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 PUSL1Q8N0Z8 303 aaKnown RBP12.56□□□□□ -0.4
SGCE-205ENST00000437425 PINX1Q96BK5 328 aaKnown RBP12.56□□□□□ -0.4
SGCE-205ENST00000437425 SSBP3Q9BWW4 388 aaPredicted RBP12.56□□□□□ -0.4
SGCE-205ENST00000437425 HIPK2Q9H2X6 1198 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 BARX1Q9HBU1 254 aaPredicted RBP12.56□□□□□ -0.4
SGCE-205ENST00000437425 PARP11Q9NR21 331 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 PRNDQ9UKY0 176 aa12.56□□□□□ -0.4
SGCE-205ENST00000437425 ASH1LQ9NR48 2969 aaKnown RBP12.56□□□□□ -0.4
SGCE-205ENST00000437425 ARID1AO14497 2285 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 A0A1W2PPR1 153 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 M0R1W7 72 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 FBXO24O75426 580 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 IFNA17P01571 189 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 FGF2P09038 288 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 OR8U8P0C7N1 319 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 CLINT1Q14677 625 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 SPANXN5Q5MJ07 72 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 UTF1Q5T230 341 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 IL34Q6ZMJ4 242 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 C1orf229Q6ZS94 237 aaPredicted RBP12.55□□□□□ -0.4
SGCE-205ENST00000437425 C11orf42Q8N5U0 333 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 OR13D1Q8NGV5 346 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 VSTM2AQ8TAG5 236 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 ST6GALNAC6Q969X2 333 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 MARC2Q969Z3 335 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 BSCL2Q96G97 398 aaPredicted RBP12.55□□□□□ -0.4
SGCE-205ENST00000437425 CLEC7AQ9BXN2 247 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 REG4Q9BYZ8 158 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 NUP50Q9UKX7 468 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 FOXA2Q9Y261 457 aaPredicted RBP12.55□□□□□ -0.4
SGCE-205ENST00000437425 ZNF257Q9Y2Q1 563 aa12.55□□□□□ -0.4
SGCE-205ENST00000437425 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 KRBOX1C9JBD0 128 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 TEX46H3BTG2 121 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 OVOL3O00110 214 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 OR9G9P0C7N8 305 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 ATP5IP56385 69 aaPredicted RBP12.54□□□□□ -0.4
SGCE-205ENST00000437425 RELBQ01201 579 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 TMEM177Q53S58 311 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 SLC25A24Q6NUK1 477 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 CLEC9AQ6UXN8 241 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 C1orf122Q6ZSJ8 110 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 TMEM217Q8N7C4 229 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 OR4A5Q8NH83 315 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 SCGB1C1Q8TD33 95 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 BET1LQ9NYM9 111 aa12.54□□□□□ -0.4
SGCE-205ENST00000437425 LOC105371242A0A075B767 164 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 IGHV2-26A0A0B4J1V2 119 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 H0YJW9 148 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 H3BP45 60 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 I3L521 148 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 F2RL1P55085 397 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 OR4A47Q6IF82 309 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 LILRB2Q8N423 598 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 COMMD1Q8N668 190 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 KIR3DL3Q8N743 410 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 LHX4Q969G2 390 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
SGCE-205ENST00000437425 QTRT1Q9BXR0 403 aaKnown RBP12.53□□□□□ -0.4
SGCE-205ENST00000437425 TMEM14BQ9NUH8 114 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 WASHC3Q9Y3C0 194 aa12.53□□□□□ -0.4
SGCE-205ENST00000437425 A8MXK9 166 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 SHOXO15266 292 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 IGLV1-47P01700 117 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 IL6RP08887 468 aaPredicted RBP12.52□□□□□ -0.4
SGCE-205ENST00000437425 METTL15P1P0C7V9 234 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 CDKN1AP38936 164 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 HSPE1P61604 102 aaKnown RBP12.52□□□□□ -0.4
SGCE-205ENST00000437425 TMEM267Q0VDI3 215 aaPredicted RBP12.52□□□□□ -0.4
SGCE-205ENST00000437425 HLA-DRB5Q30154 266 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 SSX9Q7RTT3 188 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 HSD17B11Q8NBQ5 300 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 NABP2Q9BQ15 211 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 MRPL20Q9BYC9 149 aaKnown RBP12.52□□□□□ -0.4
SGCE-205ENST00000437425 ENY2Q9NPA8 101 aa12.52□□□□□ -0.4
SGCE-205ENST00000437425 ABCA4P78363 2273 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 KALRNO60229 2985 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 YLPM1P49750 1951 aaKnown RBP12.52□□□□□ -0.41
SGCE-205ENST00000437425 H7C2Y5 167 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 C1QL1O75973 258 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 ARG1P05089 322 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 ATP6V0CP27449 155 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 LGALS7P47929 136 aa12.52□□□□□ -0.41
SGCE-205ENST00000437425 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms