RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 EIF4E3Q8N5X7 224 aaKnown RBP10.11□□□□□ -0.79
CLDN4-203ENST00000435050 C12orf57Q99622 126 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 IDI2-AS1Q9NZ38 188 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 CBY1Q9Y3M2 126 aa10.11□□□□□ -0.79
CLDN4-203ENST00000435050 HRASP01112 189 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 MMP9P14780 707 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 RAB5BP61020 215 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 ARL16Q0P5N6 197 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 ZNF714Q96N38 554 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 PLEKHA3Q9HB20 300 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 TMEM106BQ9NUM4 274 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 KBTBD11-OT1A0A1B0GTJ5 212 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 C7orf77A4D0Y5 90 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 ZNF727A8MUV8 499 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 C9JQL5 133 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 PLAUP00749 431 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 MOB3BQ86TA1 216 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 ZNF429Q86V71 674 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 CYB561D1Q8N8Q1 229 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 TAF15Q92804 592 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLDN4-203ENST00000435050 HARBI1Q96MB7 349 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 VSIRQ9H7M9 311 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 ONECUT1Q9UBC0 465 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 A0A1W2PPE2 198 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 CYB5BO43169 146 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 ZNF737O75373 536 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 LY6HO94772 140 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 ADCYAP1P18509 176 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 LMO1P25800 156 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 UCNP55089 124 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 NHLH1Q02575 133 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 ACY3Q96HD9 319 aa10.1□□□□□ -0.79
CLDN4-203ENST00000435050 OR2C1O95371 312 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 PSMB3P49720 205 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 RBMS3Q6XE24 437 aaKnown RBP10.09□□□□□ -0.79
CLDN4-203ENST00000435050 COMMD1Q8N668 190 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 ACTR3CQ9C0K3 210 aaPredicted RBP10.09□□□□□ -0.79
CLDN4-203ENST00000435050 ARV1Q9H2C2 271 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 SAA2-SAA4A0A096LPE2 208 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 SAA2P0DJI9 122 aaPredicted RBP10.09□□□□□ -0.79
CLDN4-203ENST00000435050 HNF1AP20823 631 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 DUTP33316 252 aaKnown RBP10.09□□□□□ -0.79
CLDN4-203ENST00000435050 MUC15Q8N387 334 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 PLA2G2EQ9NZK7 142 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 TRAV3A0A0B4J244 114 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 IGHV3-48P01763 117 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 CCKARP32238 428 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 PAX9P55771 341 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 HES1Q14469 280 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 Q8NA96 180 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
CLDN4-203ENST00000435050 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.08□□□□□ -0.8
CLDN4-203ENST00000435050 MYOD1P15172 320 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 DLX1P56177 255 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 TFF3Q07654 80 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 ZNF525Q8N782 197 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 RNF115Q9Y4L5 304 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 A0A1W2PPH5 198 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 KLRB1Q12918 225 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 TMEM204Q9BSN7 226 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 TMPRSS5Q9H3S3 457 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 MSRB2Q9Y3D2 182 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 IGHV1-69-2A0A0G2JMI3 117 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 GRNP28799 593 aaKnown RBP10.08□□□□□ -0.8
CLDN4-203ENST00000435050 THBS3P49746 956 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 SSX2Q16385 188 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 OR13D1Q8NGV5 346 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 RNASE6Q93091 150 aaKnown RBP10.08□□□□□ -0.8
CLDN4-203ENST00000435050 SMIM7Q9BQ49 75 aa10.08□□□□□ -0.8
CLDN4-203ENST00000435050 DVL1O14640 695 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 SNRPCP09234 159 aaKnown RBP10.07□□□□□ -0.8
CLDN4-203ENST00000435050 ACOT6Q3I5F7 207 aaPredicted RBP10.07□□□□□ -0.8
CLDN4-203ENST00000435050 MAJINQ3KP22 176 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 CT45A1Q5HYN5 189 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 CT45A3Q8NHU0 189 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 TCF19Q9Y242 345 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 TNCP24821 2201 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 hCG_1809904A0A1W2PP81 198 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 A0A1W2PR64 198 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 A0A1W2PRV1 198 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 J3QR06 171 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 MMP23AO75900 390 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 SCAF4O95104 1147 aaKnown RBP10.07□□□□□ -0.8
CLDN4-203ENST00000435050 CHRNB4P30926 498 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 HTD2P86397 168 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 LYPD2Q6UXB3 125 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 AURKAIP1Q9NWT8 199 aaPredicted RBP10.07□□□□□ -0.8
CLDN4-203ENST00000435050 NPIPB11E5RHQ5 1161 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 DNASE2O00115 360 aaPredicted RBP10.07□□□□□ -0.8
CLDN4-203ENST00000435050 ZNF134P52741 427 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 COTL1Q14019 142 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 WDR61Q9GZS3 305 aaKnown RBP10.07□□□□□ -0.8
CLDN4-203ENST00000435050 ACACBO00763 2458 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 BTBD17A6NE02 478 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 YPEL1O60688 119 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 NPY1RP25929 384 aa10.07□□□□□ -0.8
CLDN4-203ENST00000435050 CD1BP29016 333 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms