RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ZBTB8OSQ8IWT0 167 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 BOD1L2Q8IYS8 172 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 SPPL2BQ8TCT7 592 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 NEK7Q8TDX7 302 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 RNF133Q8WVZ7 376 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 MAFIPQ8WZ33 124 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 BORCS5Q969J3 196 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 FXYD5Q96DB9 178 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 DGCR14Q96DF8 476 aaKnown RBP3.27□□□□□ -1.89
USP54-206ENST00000433394 PACRGQ96M98 296 aaPredicted RBP3.27□□□□□ -1.89
USP54-206ENST00000433394 MRPS26Q9BYN8 205 aaKnown RBP3.27□□□□□ -1.89
USP54-206ENST00000433394 XPNPEP1Q9NQW7 623 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 ZNF492Q9P255 531 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 ZSWIM8A7E2V4 1837 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 PCNTO95613 3336 aa3.27□□□□□ -1.89
USP54-206ENST00000433394 GPR179Q6PRD1 2367 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 DOCK5Q9H7D0 1870 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 SIP14410 1827 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 THADAQ6YHU6 1953 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 ZNF729A6NN14 1252 aaPredicted RBP3.26□□□□□ -1.89
USP54-206ENST00000433394 KPNA3O00505 521 aaPredicted RBP3.26□□□□□ -1.89
USP54-206ENST00000433394 SLC16A4O15374 487 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 AQP9O43315 295 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 FGF16O43320 207 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 NDUFA2O43678 99 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 MPZL2O60487 215 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 IGHV3-53P01767 116 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 GYPCP04921 128 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 RNASE2P10153 161 aaKnown RBP3.26□□□□□ -1.89
USP54-206ENST00000433394 NQO1P15559 274 aaKnown RBP3.26□□□□□ -1.89
USP54-206ENST00000433394 MAGEA12P43365 314 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 MP68P56378 58 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 PSME3P61289 254 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 MGAT3Q09327 533 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 IMPG1Q17R60 797 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 HACD4Q5VWC8 232 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 LPCAT4Q643R3 524 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 ELP2Q6IA86 826 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 C12orf29Q8N999 325 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 ZIC4Q8N9L1 334 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 TMEM161BQ8NDZ6 487 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 LFNGQ8NES3 379 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 DNAJB3Q8WWF6 145 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 RASSF5Q8WWW0 418 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 CMTM5Q96DZ9 223 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 PRRT1Q99946 306 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 TRABDQ9H4I3 376 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 ARL2BPQ9Y2Y0 163 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 TBL2Q9Y4P3 447 aaKnown RBP3.26□□□□□ -1.89
USP54-206ENST00000433394 CITO14578 2027 aa3.26□□□□□ -1.89
USP54-206ENST00000433394 KIAA0100Q14667 2235 aaKnown RBP3.25□□□□□ -1.89
USP54-206ENST00000433394 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 A0A1B0GV72 72 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 A0A1W2PQL4 384 aaPredicted RBP3.25□□□□□ -1.89
USP54-206ENST00000433394 H3BQ85 93 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 M0QZ92 97 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 SYNGR1O43759 233 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 SOX14O95416 240 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 PDYNP01213 254 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 IFNA5P01569 189 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 APOC1P02654 83 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 CYBAP13498 195 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 CBR1P16152 277 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 CRABP1P29762 137 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 RAB2AP61019 212 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 BAMBIQ13145 260 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 SLC9A3R2Q15599 337 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 WHAMMP3Q1A5X7 153 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 SLC36A2Q495M3 483 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 NIPAL1Q6NVV3 410 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 IDO2Q6ZQW0 420 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 CLEC20AQ6ZU45 233 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 Q8N402 240 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 NATD1Q8N6N6 113 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 TMEM35BQ8NCS4 154 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 CMTM2Q8TAZ6 248 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 KCTD4Q8WVF5 259 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 CMBLQ96DG6 245 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 TCEAL4Q96EI5 215 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 REEP6Q96HR9 211 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 METTL9Q9H1A3 318 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 OR51E2Q9H255 320 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 WDR54Q9H977 334 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 HRASLSQ9HDD0 168 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 SPANXB1Q9NS25 103 aaPredicted RBP3.25□□□□□ -1.89
USP54-206ENST00000433394 KCNIP2Q9NS61 270 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 FGFR1OP2Q9NVK5 253 aa3.25□□□□□ -1.89
USP54-206ENST00000433394 CEP350Q5VT06 3117 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 OR5H14A6NHG9 310 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 SYNGR2O43760 224 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 ADAP1O75689 374 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 SERPINA1P01009 418 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 TRGV3P03979 118 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 CD5P06127 495 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 CD36P16671 472 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 INPP1P49441 399 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 NKX2-5P52952 324 aaPredicted RBP3.24□□□□□ -1.89
USP54-206ENST00000433394 FAM3AP98173 230 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 SKP2Q13309 424 aa3.24□□□□□ -1.89
USP54-206ENST00000433394 MMDQ15546 238 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms