RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ZNF90Q03938 601 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 TEX43Q6ZNM6 134 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 TRPT1Q86TN4 253 aaKnown RBP4.51□□□□□ -1.69
PTPN4-203ENST00000430976 TP53INP2Q8IXH6 220 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 C10orf111Q8N326 155 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 OR10J6PQ8NGY7 276 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 C10orf105Q8TEF2 133 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF681Q96N22 645 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 PRORYQ9H606 182 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 INSL5Q9Y5Q6 135 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 KIAA0100Q14667 2235 aaKnown RBP4.51□□□□□ -1.69
PTPN4-203ENST00000430976 POLR2AP24928 1970 aaKnown RBP4.51□□□□□ -1.69
PTPN4-203ENST00000430976 TRBV9A0A0B4J1U6 114 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 TRAV13-1A0A0B4J241 112 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 APOC4P55056 127 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF260Q3ZCT1 412 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 C10orf91Q5T1B1 145 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 TSPO2Q5TGU0 170 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 OR10G8Q8NGN5 311 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 CLDN23Q96B33 292 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 PDCD1LG2Q9BQ51 273 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 CSAG2Q9Y5P2 127 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 CACNA1SQ13698 1873 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 IGHV2-26A0A0B4J1V2 119 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 CPSF4LA6NMK7 179 aaKnown RBP4.51□□□□□ -1.69
PTPN4-203ENST00000430976 SHISA9B4DS77 424 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 C8orf88P0DMB2 117 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 ACVRL1P37023 503 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 GLIPR1P48060 266 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 HSPE1P61604 102 aaKnown RBP4.51□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF750Q32MQ0 723 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 CENPWQ5EE01 88 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 TMEM150AQ86TG1 271 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 C2orf15Q8WU43 125 aaKnown RBP4.51□□□□□ -1.69
PTPN4-203ENST00000430976 SSMEM1Q8WWF3 244 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 GNB1LQ9BYB4 327 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 PLEKHA3Q9HB20 300 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 GOLGA2P5Q9HBQ8 144 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 TAS2R5Q9NYW4 299 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 SF3B6Q9Y3B4 125 aaKnown RBP4.51□□□□□ -1.69
PTPN4-203ENST00000430976 IRGMA1A4Y4 181 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 C9orf118A6NHY6 69 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 GGTLC3B5MD39 225 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 ADM5C9JUS6 153 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 C1QL1O75973 258 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 NDUFA7O95182 113 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 NTN1O95631 604 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 HOXB7P09629 217 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 GNB2P62879 340 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 RPL38P63173 70 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SP4Q02446 784 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 CEACAM16Q2WEN9 425 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 BVES-AS1Q5T3Y7 98 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SLC35E4Q6ICL7 350 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 OR2T10Q8NGZ9 312 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SUSD6Q92537 303 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 KAZALD1Q96I82 304 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 RTBDNQ9BSG5 229 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 NDUFB11Q9NX14 153 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 BCL9LQ86UU0 1499 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 GCSHP23434 173 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 PCBP3P57721 371 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 KLRD1Q13241 179 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 PLK5Q496M5 336 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 Q6AWC8 147 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 LCN10Q6JVE6 187 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 ACP7Q6ZNF0 438 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF101Q8IZC7 436 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 Q8NA96 180 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SGMS2Q8NHU3 365 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 KCNS1Q96KK3 526 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 C21orf62Q9NYP8 219 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 Q9UF83 564 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 DNAJC15Q9Y5T4 150 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 RLFQ13129 1914 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 USP6P35125 1406 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 NRXN3Q9Y4C0 1643 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SMIM28A0A1B0GU29 152 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SHISA3A0PJX4 238 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 RBMY1BA6NDE4 496 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 RBMY1EA6NEQ0 496 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 HLA-DQB1P01920 261 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 LGALS2P05162 132 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 RBMY1DP0C7P1 496 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 FAM157CP0CG43 387 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 RBMY1A1P0DJD3 496 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 CTLA4P16410 223 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 BCL3P20749 454 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 CA7P43166 264 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 CACNG7P62955 275 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 VMA21Q3ZAQ7 101 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 HLA-DQA1Q5Y7H0 255 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 TMEM136Q6ZRR5 245 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 PRSS41Q7RTY9 318 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 ZCCHC24Q8N2G6 241 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SSC4DQ8WTU2 575 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF501Q96CX3 271 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 DSCR8Q96T75 97 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SDF2Q99470 211 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 CHCHD5Q9BSY4 110 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms