RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SNCGO76070 127 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 CD81P60033 236 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 Q0VFX4 171 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 MRPL30Q8TCC3 161 aaKnown RBP9.77□□□□□ -0.85
PTCH1-208ENST00000430669 GPR146Q96CH1 333 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 PITPNC1Q9UKF7 332 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 PRR32B1ATL7 298 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 ISLRO14498 428 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 LDLRAD4O15165 306 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 HYPMO75409 117 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 MMP7P09237 267 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-208ENST00000430669 OTX1P32242 354 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-208ENST00000430669 C18orf12Q96KH6 178 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 GFI1Q99684 422 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 CCKARP32238 428 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 CACNA1BQ00975 2339 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 C17orf100A8MU93 164 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 GATCO43716 136 aaKnown RBP9.77□□□□□ -0.85
PTCH1-208ENST00000430669 B3GALT5-AS1P59052 145 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 YTHDF2Q9Y5A9 579 aaKnown RBP9.77□□□□□ -0.85
PTCH1-208ENST00000430669 S1PR2O95136 353 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 SSTR5P35346 364 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 MAS1LP35410 378 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 ABHD12Q8N2K0 398 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 NIT2Q9NQR4 276 aa9.77□□□□□ -0.85
PTCH1-208ENST00000430669 LY6G6EA0A0G2JKS1 128 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 FCN1O00602 326 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 RHBDL1O75783 438 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-208ENST00000430669 ZNF430Q9H8G1 570 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-208ENST00000430669 DOK5Q9P104 306 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 METTL1Q9UBP6 276 aaKnown RBP9.76□□□□□ -0.85
PTCH1-208ENST00000430669 U3KQA8 63 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 TRAV39A0A0B4J263 110 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 C12orf57Q99622 126 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 NAT8BQ9UHF3 227 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 IGKV1-9A0A0C4DH69 117 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
PTCH1-208ENST00000430669 PCSK4Q6UW60 755 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 DNM1P46Q6ZS02 220 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 OR11H4Q8NGC9 324 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 TMPRSS5Q9H3S3 457 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 MEX3AA1L020 520 aaKnown RBP9.76□□□□□ -0.85
PTCH1-208ENST00000430669 PINLYPA6NC86 204 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 P01737 135 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 C4orf17Q53FE4 359 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 GLIPR1P48060 266 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 RIGQ13278 110 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 PLA2G2CQ5R387 149 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 RSG1Q9BU20 258 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 TNRC6AQ8NDV7 1962 aaKnown RBP9.76□□□□□ -0.85
PTCH1-208ENST00000430669 SEC14L6B5MCN3 397 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 FAM24BQ8N5W8 94 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 CELA3BP08861 270 aa9.76□□□□□ -0.85
PTCH1-208ENST00000430669 EFNA2O43921 213 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 PCGF1Q9BSM1 259 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 SCNM1Q9BWG6 230 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 SPACA3Q8IXA5 215 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 TPRX1Q8N7U7 411 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 METTL26Q96S19 204 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 BMPR1BO00238 502 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 Q6ZS49 121 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 NOL4LQ96MY1 436 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-208ENST00000430669 ORM1P02763 201 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 SLC35B1P78383 322 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 TMEM42Q69YG0 159 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 WDR82Q6UXN9 313 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 CLDN16Q9Y5I7 305 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 ABCA1O95477 2261 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 TRBV6-6A0A0A6YYG2 114 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 C7orf77A4D0Y5 90 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 FAM166AQ6J272 317 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 STPG3Q8N7X2 389 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 FAM122AQ96E09 287 aa9.75□□□□□ -0.85
PTCH1-208ENST00000430669 DNASE2O00115 360 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-208ENST00000430669 SPINK2P20155 84 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 REG1BP48304 166 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 OR8I2Q8N0Y5 310 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 LRTM2Q8N967 370 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
PTCH1-208ENST00000430669 STARD4Q96DR4 205 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 PAGE4O60829 102 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 IGHG3P01860 377 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 PAX6P26367 422 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 ID1P41134 155 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 PAQR4Q8N4S7 273 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-208ENST00000430669 SSBP3Q9BWW4 388 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-208ENST00000430669 IFT22Q9H7X7 185 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 WDR87Q6ZQQ6 2873 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 G0S2P27469 103 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 A0A1W2PS18 150 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 KCNAB3O43448 404 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 PAFAH1B2P68402 229 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 CYB561D1Q8N8Q1 229 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 NUP37Q8NFH4 326 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 DNAJC4Q9NNZ3 241 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 C12orf77C9JDV5 145 aa9.74□□□□□ -0.85
PTCH1-208ENST00000430669 HIST1H1BP16401 226 aaKnown RBP9.74□□□□□ -0.85
PTCH1-208ENST00000430669 TMEM183BQ1AE95 376 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms