RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SLC35E3Q7Z769 313 aa11.83□□□□□ -0.52
GARNL3-204ENST00000429629 PPP1R27Q86WC6 154 aa11.83□□□□□ -0.52
GARNL3-204ENST00000429629 FOXRED2Q8IWF2 684 aa11.83□□□□□ -0.52
GARNL3-204ENST00000429629 CCDC71LQ8N9Z2 235 aa11.83□□□□□ -0.52
GARNL3-204ENST00000429629 MARCH1Q8TCQ1 289 aa11.83□□□□□ -0.52
GARNL3-204ENST00000429629 MCUBQ9NWR8 336 aa11.83□□□□□ -0.52
GARNL3-204ENST00000429629 COMMD9Q9P000 198 aa11.83□□□□□ -0.52
GARNL3-204ENST00000429629 METTL1Q9UBP6 276 aaKnown RBP11.83□□□□□ -0.52
GARNL3-204ENST00000429629 IL6RP08887 468 aaPredicted RBP11.82□□□□□ -0.52
GARNL3-204ENST00000429629 NQO2P16083 231 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 PIGPP57054 158 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 ZNF57Q68EA5 555 aaPredicted RBP11.82□□□□□ -0.52
GARNL3-204ENST00000429629 FAAP20Q6NZ36 180 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 TBC1D26Q86UD7 250 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 OR4A5Q8NH83 315 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 CHPT1Q8WUD6 406 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 TAF15Q92804 592 aaKnown RBP eCLIP11.82□□□□□ -0.52
GARNL3-204ENST00000429629 RTBDNQ9BSG5 229 aaPredicted RBP11.82□□□□□ -0.52
GARNL3-204ENST00000429629 OR51J1Q9H342 316 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 FBXL15Q9H469 300 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 COPZ2Q9P299 210 aa11.82□□□□□ -0.52
GARNL3-204ENST00000429629 C14orf166Q9Y224 244 aaKnown RBP11.82□□□□□ -0.52
GARNL3-204ENST00000429629 IGHV7-81A0A0B4J1V7 117 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 SLC25A17O43808 307 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 RLN1P04808 185 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 VSIG10L2P0DP72 767 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 CX3CL1P78423 397 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 ZNF585BQ52M93 769 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 PHLDA2Q53GA4 152 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 ARSJQ5FYB0 599 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-204ENST00000429629 SHISA2Q6UWI4 295 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 PUSL1Q8N0Z8 303 aaKnown RBP11.81□□□□□ -0.52
GARNL3-204ENST00000429629 COMMD1Q8N668 190 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 C3orf56Q8N813 242 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 OR51H1Q8NH63 302 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 WFDC12Q8WWY7 111 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 RHOVQ96L33 236 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 GPHA2Q96T91 129 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 C5orf66Q9H5L9 145 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 BET1LQ9NYM9 111 aa11.81□□□□□ -0.52
GARNL3-204ENST00000429629 STAB1Q9NY15 2570 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 H0Y980 276 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 FCN1O00602 326 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 RAMP3O60896 148 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 OR2A4O95047 310 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 MAS1LP35410 378 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 PLGLAQ15195 96 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 PRSS8Q16651 343 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 C9orf152Q5JTZ5 239 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 TMEM167AQ8TBQ9 72 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 OR2A7Q96R45 310 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 CITED1Q99966 193 aa11.8□□□□□ -0.52
GARNL3-204ENST00000429629 PIGBOS1A0A0B4J2F0 54 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 C3orf85A0A1B0GTC6 90 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 PEX14O75381 377 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 ATG12O94817 140 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 SERPINE2P07093 398 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 SAA1P0DJI8 122 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-204ENST00000429629 LPAR6P43657 344 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 TMEM267Q0VDI3 215 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-204ENST00000429629 AKIRIN2Q53H80 203 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-204ENST00000429629 MMD2Q8IY49 270 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 STPG2Q8N412 459 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 KLHDC1Q8N7A1 406 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 RBMXL1Q96E39 390 aaKnown RBP11.79□□□□□ -0.52
GARNL3-204ENST00000429629 GALNT14Q96FL9 552 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 HSPB9Q9BQS6 159 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 KCNIP3Q9Y2W7 256 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 NUBP2Q9Y5Y2 271 aa11.79□□□□□ -0.52
GARNL3-204ENST00000429629 CRYM-AS1A6NIL9 109 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 SH2D7A6NKC9 451 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-204ENST00000429629 LINC01548A6NM66 108 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 PLA2G10O15496 165 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 PI3P19957 117 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 UCP1P25874 307 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 SLC35B1P78383 322 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 DHODHQ02127 395 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 RBMS2Q15434 407 aaKnown RBP11.78□□□□□ -0.52
GARNL3-204ENST00000429629 MRGPRG-AS1Q2M3A8 158 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 SGMS2Q8NHU3 365 aa11.78□□□□□ -0.52
GARNL3-204ENST00000429629 TENM1Q9UKZ4 2725 aa11.77□□□□□ -0.52
GARNL3-204ENST00000429629 KBTBD11O94819 623 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 S1PR2O95136 353 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 NDUFB6O95139 128 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 BRI3O95415 125 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 CDS2O95674 445 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 CA2P00918 260 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 EGR2P11161 476 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-204ENST00000429629 PPIFP30405 207 aaKnown RBP11.77□□□□□ -0.53
GARNL3-204ENST00000429629 UBE2MP61081 183 aaKnown RBP11.77□□□□□ -0.53
GARNL3-204ENST00000429629 ERVK-16P61578 105 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 CFHR3Q02985 330 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 FXYD3Q14802 87 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM128Q5BJH2 165 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 SGPP2Q8IWX5 399 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 RNF152Q8N8N0 203 aa11.77□□□□□ -0.53
GARNL3-204ENST00000429629 MINDY2Q8NBR6 621 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms